Factsheet for HORVU7Hr1G049130.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G057200.4
HORVU7Hr1G023760.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26440.1	HORVU7Hr1G023760.2	AT2G43790.1	24830428
AT4G26440.1	HORVU4Hr1G057200.4	AT3G45640.1	24830428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G136400.2	Wheat	nucleus, plastid	82.04	31.75
TraesCS7D01G239800.2	Wheat	nucleus	80.41	31.37
TraesCS7A01G240800.1	Wheat	nucleus	81.22	30.57
Bra028939.1-P	Field mustard	nucleus	39.18	21.38
Os08t0499300-01	Rice	nucleus	55.51	20.18
GSMUA_Achr6P03500_001	Banana	nucleus	40.82	19.42
OQU80981	Sorghum	nucleus	51.84	18.54
HORVU5Hr1G072020.1	Barley	nucleus	51.02	18.49
GSMUA_Achr5P23900_001	Banana	nucleus	40.0	17.35
Zm00001d052847_P001	Maize	nucleus	51.43	17.28
CDY11947	Canola	nucleus	40.0	17.07
GSMUA_Achr5P04150_001	Banana	nucleus	42.04	16.27
CDY32799	Canola	nucleus	39.18	15.97
GSMUA_Achr4P01600_001	Banana	nucleus	43.27	15.92
CDY36788	Canola	nucleus	40.41	15.87
CDX89336	Canola	nucleus	33.88	15.54
Bra026438.1-P	Field mustard	nucleus	33.47	15.36
GSMUA_Achr11P...	Banana	nucleus	40.0	15.15
CDX94335	Canola	nucleus	31.43	14.98
AT4G26440.1	Thale cress	nucleus	34.29	14.79
HORVU2Hr1G034420.2	Barley	nucleus	26.94	14.73
HORVU1Hr1G070250.2	Barley	nucleus, plastid	30.61	14.65
HORVU0Hr1G004890.10	Barley	nucleus	35.92	14.62
CDY69527	Canola	nucleus	32.24	14.55
HORVU5Hr1G028340.1	Barley	nucleus	28.98	14.43
Bra002828.1-P	Field mustard	nucleus	39.59	14.41
CDY49388	Canola	nucleus	39.18	14.31
CDY42736	Canola	nucleus	30.2	13.99
Bra019105.1-P	Field mustard	nucleus	30.2	13.99
AT5G56270.1	Thale cress	nucleus	38.37	13.68
HORVU3Hr1G088200.4	Barley	nucleus, plastid	32.24	13.19
HORVU2Hr1G036320.1	Barley	nucleus	33.06	13.17
HORVU4Hr1G048400.1	Barley	mitochondrion	26.94	12.48
VIT_19s0015g01870.t01	Wine grape	nucleus	34.69	11.39
PGSC0003DMT400029328	Potato	nucleus	29.8	10.47
KRH62550	Soybean	nucleus	32.24	10.38
KRH56379	Soybean	nucleus	32.24	10.18
HORVU7Hr1G066670.4	Barley	nucleus	23.67	10.0
Solyc10g005680.1.1	Tomato	nucleus	26.12	9.1

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287WFB4	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU7Hr1G049130	EnsemblPlants:HORVU7Hr1G049130.1	InterPro:IPR003657	InterPro:IPR036576
PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF86	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI000B482544	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr7H:-:170723442..170725809

Molecular Weight (calculated)

26381.4 Da

IEP (calculated)

10.356

GRAVY (calculated)

-0.562

Length

245 amino acids

Sequence
(BLAST)

001: MQSPELPCQE KGGALSRRRY NGDSLQRFSQ SPFTASRQTP RCRRLLTPQR MMDYVTPATA IGTIDIGALA SRAVREARVI VQTTSEVDVL DDGYRWRKYG
101: QKVVKGNPNP RSYYKCTHPS CPVRKHVERA SNDPKSVITT YEGRHTHEVP TDRNNGHPSS GHGGVAPPPA QGGGGIIPQY TGAAAYGSIA QLGVADGFPF
201: GVLPRGLALV PVPAQMMAGD PSAMQGSPRL VLQAREVKGN PAARP

Best Arabidopsis Sequence Match ( AT5G56270.1 )
(BLAST)

001: MAGFDENVAV MGEWVPRSPS PGTLFSSAIG EEKSSKRVLE RELSLNHGQV IGLEEDTSSN HNKDSSQSNV FRGGLSERIA ARAGFNAPRL NTENIRTNTD
101: FSIDSNLRSP CLTISSPGLS PATLLESPVF LSNPLAQPSP TTGKFPFLPG VNGNALSSEK AKDEFFDDIG ASFSFHPVSR SSSSFFQGTT EMMSVDYGNY
201: NNRSSSHQSA EEVKPGSENI ESSNLYGIET DNQNGQNKTS DVTTNTSLET VDHQEEEEEQ RRGDSMAGGA PAEDGYNWRK YGQKLVKGSE YPRSYYKCTN
301: PNCQVKKKVE RSREGHITEI IYKGAHNHLK PPPNRRSGMQ VDGTEQVEQQ QQQRDSAATW VSCNNTQQQG GSNENNVEEG STRFEYGNQS GSIQAQTGGQ
401: YESGDPVVVV DASSTFSNDE DEDDRGTHGS VSLGYDGGGG GGGGEGDESE SKRRKLEAFA AEMSGSTRAI REPRVVVQTT SDVDILDDGY RWRKYGQKVV
501: KGNPNPRSYY KCTAPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHGGGGDSG NGNSGGSAAV SHHYHNGHHS EPPRGRFDRQ VTTNNQSPFS
601: RPFSFQPHLG PPSGFSFGLG QTGLVNLSMP GLAYGQGKMP GLPHPYMTQP VGMSEAMMQR GMEPKVEPVS DSGQSVYNQI MSRLPQI

Arabidopsis Description

WRKY2Probable WRKY transcription factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG77]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.