Factsheet for HORVU1Hr1G070250.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 6
plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G004060.1
HORVU1Hr1G049500.2
HORVU5Hr1G007670.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38470.1	HORVU0Hr1G004060.1	AT3G18690.1	15990873
AT2G38470.1	HORVU5Hr1G007670.2	AT3G18690.1	15990873
AT2G38470.1	HORVU0Hr1G004060.1	AT3G18690.1	18650934
AT2G38470.1	HORVU5Hr1G007670.2	AT3G18690.1	18650934
AT2G38470.1	HORVU0Hr1G004060.1	AT3G18690.1	21203436
AT2G38470.1	HORVU5Hr1G007670.2	AT3G18690.1	21203436
AT2G38470.1	HORVU1Hr1G049500.2	AT4G01370.1	18650934

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G298600.1	Wheat	nucleus, plastid	91.41	92.67
TraesCS1B01G308200.1	Wheat	nucleus, plastid	91.8	92.34
TraesCS1D01G292700.1	Wheat	nucleus, plastid	90.23	91.12
Os05t0474800-01	Rice	nucleus	63.87	57.17
Zm00001d038451_P001	Maize	nucleus	54.69	50.27
OQU78174	Sorghum	nucleus	61.72	48.69
HORVU3Hr1G088200.4	Barley	nucleus, plastid	56.84	48.58
GSMUA_Achr3P09940_001	Banana	nucleus	32.03	44.81
Bra017117.1-P	Field mustard	nucleus	39.06	43.2
Bra005104.1-P	Field mustard	nucleus	38.48	43.11
Bra000064.1-P	Field mustard	nucleus	39.26	42.49
CDY07729	Canola	nucleus	39.26	42.49
KRG98195	Soybean	nucleus	44.92	42.44
KRH17125	Soybean	nucleus	47.66	42.43
KRH72765	Soybean	nucleus	47.85	42.24
CDY18383	Canola	nucleus, plastid	39.45	42.0
KRH30155	Soybean	nucleus	44.92	41.97
PGSC0003DMT400043204	Potato	nucleus	43.75	41.95
CDY65564	Canola	nucleus, plastid	38.28	41.61
CDY69941	Canola	nucleus, plastid	38.67	41.51
CDX91470	Canola	nucleus, plastid	38.48	41.39
Solyc06g066370.2.1	Tomato	nucleus	43.16	41.31
CDY14459	Canola	nucleus, plastid	39.26	41.02
GSMUA_Achr6P32720_001	Banana	nucleus	35.74	40.13
VIT_06s0004g07500.t01	Wine grape	nucleus	46.88	39.8
AT2G38470.1	Thale cress	nucleus, plastid	40.04	39.5
CDY48650	Canola	nucleus, plastid	31.84	36.79
GSMUA_Achr8P01790_001	Banana	nucleus	36.52	32.81
HORVU7Hr1G049130.1	Barley	nucleus, plastid	14.65	30.61
HORVU2Hr1G034420.2	Barley	nucleus	24.61	28.12
HORVU5Hr1G028340.1	Barley	nucleus	26.95	28.05
HORVU4Hr1G048400.1	Barley	mitochondrion	26.17	25.33
HORVU0Hr1G004890.10	Barley	nucleus	29.1	24.75
HORVU2Hr1G036320.1	Barley	nucleus	29.3	24.39
HORVU5Hr1G072020.1	Barley	nucleus	30.27	22.93
HORVU7Hr1G066670.4	Barley	nucleus	21.68	19.14

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	MapMan:26.8.3.3.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU1Hr1G070250	EnsemblPlants:HORVU1Hr1G070250.2	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0YT11	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF76	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000294D20C	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:-:488799209..488802078

Molecular Weight (calculated)

55498.4 Da

IEP (calculated)

5.171

GRAVY (calculated)

-0.820

Length

512 amino acids

Sequence
(BLAST)

001: MAMTPPSSFP PASPSSYFNM SSGFLDSPVL LTPSLFASPT TGAFPSHQFN WMGTPENEGL QGSTTNQDEQ QQYSGFTFQT TAPPPVATTT ASSFLQSSMP
101: MAQLVGDSYP QQQPWSYEDT GMNGSTRPAE FTTQFEPPTT STIMATTAPD VLGNGAYSVP VSSGTAAYRV QSRRPSSDDG YNWRKYGQKQ MKGSENPRSY
201: YKCSFAGCPT KKKVEQAPDG QVTEIVYKGT HNHPKPQNPR RGSGSAASSS YALQYQGSND VSSDALSGTP ENSSASYGED ETNGVSSRLA GAVSGGEDQF
301: DSEEPDSKRW RNDGDGEGTI MAVGNRTVRE PRVVVQTMSD IDILDDGYRW RKYGQKVVKG NPNPRSYYKC TTPNCPVRKH VERASQDLRA VVTTYEGKHN
401: HDVPAARGSG AAAARYRAAT LQPAASYLQG AGGYSSLRPD GFGGLDDVGA PAEMSGFALS GFNNPSYSYA SMQEQQQPQQ QQQQQNDAMY YDASRAKDEP
501: RDDMFFGQSL MF

Best Arabidopsis Sequence Match ( AT2G03340.1 )
(BLAST)

001: MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS NLFSDPDEFK SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT

Arabidopsis Description

WRKY3Putative WRKY DNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WPM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.