Factsheet for HORVU3Hr1G088200.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G004060.1
HORVU1Hr1G049500.2
HORVU5Hr1G007670.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38470.1	HORVU0Hr1G004060.1	AT3G18690.1	15990873
AT2G38470.1	HORVU5Hr1G007670.2	AT3G18690.1	15990873
AT2G38470.1	HORVU0Hr1G004060.1	AT3G18690.1	18650934
AT2G38470.1	HORVU5Hr1G007670.2	AT3G18690.1	18650934
AT2G38470.1	HORVU0Hr1G004060.1	AT3G18690.1	21203436
AT2G38470.1	HORVU5Hr1G007670.2	AT3G18690.1	21203436
AT2G38470.1	HORVU1Hr1G049500.2	AT4G01370.1	18650934

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G341100.1	Wheat	nucleus	87.81	93.76
TraesCS3A01G347500.1	Wheat	nucleus	85.98	91.64
TraesCS3B01G379200.1	Wheat	nucleus	85.48	91.59
Os01t0826400-01	Rice	extracellular	68.11	73.51
Zm00001d043025_P001	Maize	nucleus	65.28	70.45
KXG33637	Sorghum	nucleus	64.77	69.78
Zm00001d012482_P001	Maize	nucleus	62.44	63.07
HORVU1Hr1G070250.2	Barley	nucleus, plastid	48.58	56.84
GSMUA_Achr3P09940_001	Banana	nucleus	31.39	51.37
GSMUA_Achr6P32720_001	Banana	nucleus	36.73	48.25
KRH72765	Soybean	nucleus	46.41	47.93
Bra005104.1-P	Field mustard	nucleus	36.39	47.7
KRH17125	Soybean	nucleus	45.58	47.48
CDY65564	Canola	nucleus, plastid	36.56	46.5
Bra017117.1-P	Field mustard	nucleus	35.89	46.44
CDX91470	Canola	nucleus, plastid	36.73	46.22
Bra000064.1-P	Field mustard	nucleus	36.39	46.09
CDY07729	Canola	nucleus	36.39	46.09
VIT_06s0004g07500.t01	Wine grape	nucleus	46.24	45.94
PGSC0003DMT400043204	Potato	nucleus	40.57	45.51
CDY69941	Canola	nucleus, plastid	36.23	45.49
Solyc06g066370.2.1	Tomato	nucleus	40.4	45.23
CDY18383	Canola	nucleus, plastid	36.23	45.11
CDY14459	Canola	nucleus, plastid	36.89	45.1
KRG98195	Soybean	nucleus	40.57	44.83
KRH30155	Soybean	nucleus	40.4	44.16
AT2G38470.1	Thale cress	nucleus, plastid	37.23	42.97
CDY48650	Canola	nucleus, plastid	30.05	40.63
GSMUA_Achr8P01790_001	Banana	nucleus	37.73	39.65
HORVU7Hr1G049130.1	Barley	nucleus, plastid	13.19	32.24
HORVU5Hr1G028340.1	Barley	nucleus	25.88	31.5
HORVU2Hr1G034420.2	Barley	nucleus	21.87	29.24
HORVU4Hr1G048400.1	Barley	mitochondrion	24.71	27.98
HORVU0Hr1G004890.10	Barley	nucleus	27.88	27.74
HORVU5Hr1G072020.1	Barley	nucleus	31.22	27.66
HORVU2Hr1G036320.1	Barley	nucleus	27.55	26.83
HORVU7Hr1G066670.4	Barley	nucleus	20.7	21.38

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	MapMan:26.8.3.3.1	UniProt:A0A287M507	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009737	GO:GO:0009739
GO:GO:0009753	GO:GO:0009788	GO:GO:0009938	GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:HORVU3Hr1G088200
EnsemblPlants:HORVU3Hr1G088200.4	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221
PANTHER:PTHR31221:SF76	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000B47EA5E	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:624065176..624067709

Molecular Weight (calculated)

63402.4 Da

IEP (calculated)

8.724

GRAVY (calculated)

-0.770

Length

599 amino acids

Sequence
(BLAST)

001: IAPLPPASSS LSLAVRARRT SKTAVASRNA HARDFGSEPS PMTTSSSGSV ETSANSRPGS FSFGSASFTE MLGGSAAAGG ASGYKALTPP SLPLSPSLMS
101: PSSFFSMPAG MNLADFLDSP VLLTSSVFPS PTTGAFGTQF NWRPEAPAPG AAEQGANKEE QRQPYSDFSF QTAPANSDEA ARATTTSFQQ PPVPVASQVR
201: SRSTGQQPQQ QAWGYGQQAA GANPASFSAP ALPATSSETA PAGVYRQTHS QRRSSDDGYN WRKYGQKQVK GSENPRSYYK CTFPNCPTKK KVETSLEGQI
301: TEIVYKGTHN HAKPLNTRRG SGGGAAAAQV LQSGGDASEN SFGAMVTTPE NSSASFGDDE NAVSSPRAGG DNDDDEPDSK RRKDGGDGEG INMAGNRTVR
401: EPRVVVQTMS DIDILDDGYR WRKYGQKVVK GNPNPRSYYK CTTVGCPVRK HVERASHDLR AVITTYEGKH NHDVPAARGS AALYRPAPRA ADSTASTGHY
501: LNPQPSAMAY QTGTGGPNVA AAGTQQYAPR PDGFGGQNQG FSGPGFNGGF GFSGPGFDNP TASYMSQHQQ QQRQNDAMHA SSAKEELREE DMFFQNSQY

Best Arabidopsis Sequence Match ( AT2G38470.1 )
(BLAST)

001: MAASFLTMDN SRTRQNMNGS ANWSQQSGRT STSSLEDLEI PKFRSFAPSS ISISPSLVSP STCFSPSLFL DSPAFVSSSA NVLASPTTGA LITNVTNQKG
101: INEGDKSNNN NFNLFDFSFH TQSSGVSAPT TTTTTTTTTT TTNSSIFQSQ EQQKKNQSEQ WSQTETRPNN QAVSYNGREQ RKGEDGYNWR KYGQKQVKGS
201: ENPRSYYKCT FPNCPTKKKV ERSLEGQITE IVYKGSHNHP KPQSTRRSSS SSSTFHSAVY NASLDHNRQA SSDQPNSNNS FHQSDSFGMQ QEDNTTSDSV
301: GDDEFEQGSS IVSRDEEDCG SEPEAKRWKG DNETNGGNGG GSKTVREPRI VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTI GCPVRKHVER
401: ASHDMRAVIT TYEGKHNHDV PAARGSGYAT NRAPQDSSSV PIRPAAIAGH SNYTTSSQAP YTLQMLHNNN TNTGPFGYAM NNNNNNSNLQ TQQNFVGGGF
501: SRAKEEPNEE TSFFDSFMP

Arabidopsis Description

WRKY33WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.