Factsheet for Os01t0826400-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0539500-01
Os04t0417600-00
Os08t0102900-00
Os10t0533600-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38470.1	Os02t0539500-01	AT3G18690.1	15990873
AT2G38470.1	Os04t0417600-00	AT3G18690.1	15990873
AT2G38470.1	Os08t0102900-00	AT3G18690.1	15990873
AT2G38470.1	Os02t0539500-01	AT3G18690.1	18650934
AT2G38470.1	Os04t0417600-00	AT3G18690.1	18650934
AT2G38470.1	Os08t0102900-00	AT3G18690.1	18650934
AT2G38470.1	Os02t0539500-01	AT3G18690.1	21203436
AT2G38470.1	Os04t0417600-00	AT3G18690.1	21203436
AT2G38470.1	Os08t0102900-00	AT3G18690.1	21203436
AT2G38470.1	Os10t0533600-01	AT4G01370.1	18650934

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043025_P001	Maize	nucleus	78.2	78.2
KXG33637	Sorghum	nucleus	77.3	77.16
TraesCS3B01G379200.1	Wheat	nucleus	75.14	74.6
TraesCS3D01G341100.1	Wheat	nucleus	75.32	74.51
TraesCS3A01G347500.1	Wheat	nucleus	75.14	74.2
Zm00001d012482_P001	Maize	nucleus	74.77	69.98
HORVU3Hr1G088200.4	Barley	nucleus, plastid	73.51	68.11
Os05t0474800-01	Rice	nucleus	57.3	55.59
GSMUA_Achr3P09940_001	Banana	nucleus	34.41	52.19
KRH17125	Soybean	nucleus	52.25	50.43
KRH72765	Soybean	nucleus	52.61	50.34
GSMUA_Achr6P32720_001	Banana	nucleus	40.54	49.34
Bra005104.1-P	Field mustard	nucleus	39.82	48.36
VIT_06s0004g07500.t01	Wine grape	nucleus	51.89	47.76
CDY65564	Canola	nucleus, plastid	40.36	47.56
CDX91470	Canola	nucleus, plastid	40.36	47.06
Os05t0343400-01	Rice	nucleus	41.08	46.82
PGSC0003DMT400043204	Potato	nucleus	45.05	46.82
KRG98195	Soybean	nucleus	45.59	46.68
Bra000064.1-P	Field mustard	nucleus	39.64	46.51
CDY07729	Canola	nucleus	39.64	46.51
Solyc06g066370.2.1	Tomato	nucleus	44.68	46.36
Bra017117.1-P	Field mustard	nucleus	38.56	46.22
KRH30155	Soybean	nucleus	45.59	46.17
CDY14459	Canola	nucleus, plastid	40.36	45.71
CDY69941	Canola	nucleus, plastid	39.1	45.49
CDY18383	Canola	nucleus, plastid	39.28	45.32
AT2G38470.1	Thale cress	nucleus, plastid	40.72	43.55
CDY48650	Canola	nucleus, plastid	33.51	41.99
GSMUA_Achr8P01790_001	Banana	nucleus	40.9	39.82
Os12t0507300-00	Rice	nucleus	24.86	34.59
Os03t0758950-01	Rice	nucleus, plastid	25.05	31.66
Os07t0596900-00	Rice	nucleus	24.32	31.25
Os07t0583700-01	Rice	nucleus	33.33	29.94
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	18.92	28.15
Os08t0499300-01	Rice	nucleus	32.07	26.41
Os09t0481700-01	Rice	nucleus	25.05	21.96
Os08t0276200-01	Rice	cytosol, nucleus, plastid	12.25	18.58
Os04t0471700-00	Rice	nucleus	32.43	18.04
Os03t0758900-01	Rice	plastid	0.9	1.23

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	MapMan:26.8.3.3.1	EntrezGene:4327518	EMBL:AK107199	EMBL:AY341849
EMBL:AY870608	ProteinID:BAB61266.1	ProteinID:BAF06589.1	ProteinID:BAS75019.1	ProteinID:DAA05089.1	ProteinID:EAZ14002.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009737	GO:GO:0009738	GO:GO:0009739	GO:GO:0009740	GO:GO:0009753	GO:GO:0009788
GO:GO:0009938	GO:GO:0009987	GO:GO:0043565	GO:GO:0045893	InterPro:IPR003657	InterPro:IPR036576
EnsemblPlantsGene:Os01g0826400	EnsemblPlants:Os01t0826400-01	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF76
UniProt:Q6IEQ7	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00003B31C1	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
RefSeq:XP_015619871.1	SEG:seg	:	:	:	:

Description

WRKY GENE 24WRKY transcription factor 24 (WRKY24). (Os01t0826400-01)

Coordinates

chr1:+:35347982..35350546

Molecular Weight (calculated)

59308.8 Da

IEP (calculated)

7.109

GRAVY (calculated)

-0.826

Length

555 amino acids

Sequence
(BLAST)

001: MTTSSSGSVE TSANSRLGTF SFASASFTDL LGGNAGAGGG GVSRYKAMTP PSLPLSPPPV SPSSFFNSPI GMNQADFLGS PVLLTSSIFP SPTTGAFASQ
101: HFDWRPEVAA AQSADQGGKD EQRNSYSDFS FQTAPASEEA VRTTTFQPPV PPAPLGDEAY RSQQQQQPWG YQQQPAGMDA GANAASFGAA PFQATSSEMA
201: PQVQGGGGYS QPQSQRRSSD DGYNWRKYGQ KQVKGSENPR SYYKCTFPNC PTKKKVERSL DGQITEIVYK GTHNHAKPQN TRRNSGSSAA QVLQSGGDMS
301: EHSFGGMSGT AATPENSSAS FGDDEIRVGS PRAGNGGGDE FDDDEPDSKR WRKDGDGEGI SMAGNRTVRE PRVVVQTMSD IDILDDGYRW RKYGQKVVKG
401: NPNPRSYYKC TTAGCPVRKH VERASHDLRA VITTYEGKHN HDVPAARGSA ALYRPAPPAA AATSSHPYLP NQPPPMSYQP TGPQPYALRP DGFGGQGPFG
501: GVVGGSSFGG FSGFDDARGS YMSQHQQQQR QNDAMHASRA KEEPGDDMFF QNSLY

Best Arabidopsis Sequence Match ( AT2G38470.1 )
(BLAST)

001: MAASFLTMDN SRTRQNMNGS ANWSQQSGRT STSSLEDLEI PKFRSFAPSS ISISPSLVSP STCFSPSLFL DSPAFVSSSA NVLASPTTGA LITNVTNQKG
101: INEGDKSNNN NFNLFDFSFH TQSSGVSAPT TTTTTTTTTT TTNSSIFQSQ EQQKKNQSEQ WSQTETRPNN QAVSYNGREQ RKGEDGYNWR KYGQKQVKGS
201: ENPRSYYKCT FPNCPTKKKV ERSLEGQITE IVYKGSHNHP KPQSTRRSSS SSSTFHSAVY NASLDHNRQA SSDQPNSNNS FHQSDSFGMQ QEDNTTSDSV
301: GDDEFEQGSS IVSRDEEDCG SEPEAKRWKG DNETNGGNGG GSKTVREPRI VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTI GCPVRKHVER
401: ASHDMRAVIT TYEGKHNHDV PAARGSGYAT NRAPQDSSSV PIRPAAIAGH SNYTTSSQAP YTLQMLHNNN TNTGPFGYAM NNNNNNSNLQ TQQNFVGGGF
501: SRAKEEPNEE TSFFDSFMP

Arabidopsis Description

WRKY33WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.