Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21547461
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36569 | Sorghum | nucleus | 80.26 | 81.18 |
| Zm00001d021947_P002 | Maize | nucleus | 78.32 | 78.96 |
| Zm00001d006702_P001 | Maize | nucleus | 77.67 | 78.69 |
| GSMUA_Achr4P13970_001 | Banana | nucleus | 46.93 | 56.53 |
| GSMUA_Achr7P25840_001 | Banana | nucleus | 20.39 | 51.01 |
| GSMUA_Achr3P29850_001 | Banana | nucleus | 47.41 | 50.87 |
| KRG98564 | Soybean | nucleus | 43.69 | 46.79 |
| KRH46302 | Soybean | nucleus | 43.53 | 46.62 |
| VIT_19s0090g01720.t01 | Wine grape | nucleus | 43.69 | 45.76 |
| KRH14276 | Soybean | nucleus | 42.56 | 44.96 |
| Bra028971.1-P | Field mustard | nucleus | 35.28 | 44.95 |
| KRH73864 | Soybean | nucleus | 42.72 | 44.9 |
| CDY70490 | Canola | nucleus | 37.54 | 44.79 |
| AT4G26640.2 | Thale cress | nucleus | 40.13 | 44.52 |
| CDX92808 | Canola | nucleus | 37.54 | 44.27 |
| CDY46692 | Canola | nucleus | 37.05 | 43.62 |
| CDX97359 | Canola | nucleus | 37.86 | 43.58 |
| Bra010431.1-P | Field mustard | nucleus | 38.19 | 43.3 |
| CDY14304 | Canola | nucleus | 38.19 | 43.14 |
| CDX89317 | Canola | nucleus | 37.05 | 42.88 |
| CDX94303 | Canola | nucleus | 36.89 | 42.86 |
| Bra026414.1-P | Field mustard | nucleus | 36.73 | 42.43 |
| VIT_00s0463g00010.t01 | Wine grape | nucleus | 41.42 | 41.83 |
| PGSC0003DMT400076670 | Potato | nucleus | 40.78 | 41.24 |
| Solyc12g014610.1.1 | Tomato | nucleus | 40.78 | 41.24 |
| PGSC0003DMT400057409 | Potato | nucleus | 38.03 | 39.43 |
| Solyc07g065260.2.1 | Tomato | nucleus | 38.03 | 39.43 |
| TraesCS2B01G217400.2 | Wheat | nucleus | 37.86 | 38.11 |
| TraesCS2A01G189700.1 | Wheat | nucleus | 37.7 | 38.07 |
| HORVU2Hr1G036320.1 | Barley | nucleus | 37.38 | 37.56 |
| TraesCS2D01G198100.4 | Wheat | nucleus | 37.54 | 36.36 |
| KRH49522 | Soybean | extracellular, plasma membrane | 14.72 | 36.11 |
| Os05t0343400-01 | Rice | nucleus | 27.18 | 34.5 |
| VIT_12s0057g00550.t01 | Wine grape | nucleus | 21.84 | 33.5 |
| Os01t0826400-01 | Rice | extracellular | 29.94 | 33.33 |
| Os12t0507300-00 | Rice | nucleus | 21.52 | 33.33 |
| Bra019095.1-P | Field mustard | nucleus | 37.54 | 30.77 |
| CDX93073 | Canola | nucleus | 18.12 | 30.43 |
| Os03t0758950-01 | Rice | nucleus, plastid | 21.36 | 30.07 |
| Os05t0474800-01 | Rice | nucleus | 27.51 | 29.72 |
| Solyc12g006170.1.1 | Tomato | nucleus | 19.9 | 29.64 |
| Os07t0596900-00 | Rice | nucleus | 20.55 | 29.4 |
| Solyc07g047960.2.1 | Tomato | nucleus | 19.58 | 29.3 |
| Os08t0499300-01 | Rice | nucleus | 31.39 | 28.78 |
| PGSC0003DMT400015754 | Potato | nucleus | 19.26 | 28.2 |
| CDY50038 | Canola | nucleus | 18.93 | 26.83 |
| KRH74020 | Soybean | nucleus | 21.84 | 26.63 |
| Bra013187.1-P | Field mustard | nucleus | 19.26 | 26.62 |
| KRH14103 | Soybean | nucleus | 21.84 | 26.57 |
| Os03t0444900-00 | Rice | endoplasmic reticulum, golgi | 15.86 | 26.27 |
| AT2G04880.1 | Thale cress | nucleus | 18.61 | 23.61 |
| PGSC0003DMT400074158 | Potato | nucleus | 20.71 | 23.32 |
| Os09t0481700-01 | Rice | nucleus | 23.46 | 22.91 |
| Os04t0471700-00 | Rice | nucleus | 30.1 | 18.64 |
| Os08t0276200-01 | Rice | cytosol, nucleus, plastid | 8.9 | 15.03 |
| Os03t0758900-01 | Rice | plastid | 0.16 | 0.25 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:4343736 | EMBL:AK070537 | EMBL:AY341850 | ProteinID:BAC55609.1 |
| ProteinID:BAF22030.1 | ProteinID:BAT02362.1 | ProteinID:EAZ40447.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009611 | GO:GO:0009719 | GO:GO:0009961 | GO:GO:0009987 | GO:GO:0043565 |
| GO:GO:0045893 | EMBL:HQ858834 | InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlantsGene:Os07g0583700 | EnsemblPlants:Os07t0583700-01 |
| PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF79 | UniProt:Q84ZS7 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0000004479 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | RefSeq:XP_015646742.1 | SEG:seg |
Description
WRKY GENE 87WRKY transcription factor 78. (Os07t0583700-01)
Coordinates
chr7:-:23654137..23659609
Molecular Weight (calculated)
66167.3 Da
IEP (calculated)
6.332
GRAVY (calculated)
-0.683
Length
618 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSPNPSSG DHPAGVGGSP EKQPPVDRRV AALAAGAAGA GARYKAMSPA RLPISREPCL TIPAGFSPSA LLESPVLLTN FKVEPSPTTG TLSMAAIMNK
101: SANPDILPSP RDKTSGSTHE DGGSRDFEFK PHLNSSSQST ASAINDPKKH ETSMKNESLN TALSSDDMMI DNIPLCSRES TLAVNISSAP SQLVGMVGLT
201: DSSPAEVGTS ELHQMNSSGN AMQESQPESV AEKSAEDGYN WRKYGQKHVK GSENPRSYYK CTHPNCDVKK LLERSLDGQI TEVVYKGRHN HPKPQPNRRL
301: SAGAVPPIQG EERYDGVATT DDKSSNVLSI LGNAVHTAGM IEPVPGSASD DDNDAGGGRP YPGDDAVEDD DLESKRRKME SAAIDAALMG KPNREPRVVV
401: QTVSEVDILD DGYRWRKYGQ KVVKGNPNPR SYYKCTNTGC PVRKHVERAS HDPKSVITTY EGKHNHEVPA SRNASHEMST PPMKPVVHPI NSNMQGLGGM
501: MRACEPRTFP NQYSQAAESD TISLDLGVGI SPNHSDATNQ LQSSVSDQMQ YQMQPMGSVY SNMGLPAMAM PTMAGNAASN IYGSREEKPS EGFTFKATPM
601: DHSANLCYST AGNLVMGP
101: SANPDILPSP RDKTSGSTHE DGGSRDFEFK PHLNSSSQST ASAINDPKKH ETSMKNESLN TALSSDDMMI DNIPLCSRES TLAVNISSAP SQLVGMVGLT
201: DSSPAEVGTS ELHQMNSSGN AMQESQPESV AEKSAEDGYN WRKYGQKHVK GSENPRSYYK CTHPNCDVKK LLERSLDGQI TEVVYKGRHN HPKPQPNRRL
301: SAGAVPPIQG EERYDGVATT DDKSSNVLSI LGNAVHTAGM IEPVPGSASD DDNDAGGGRP YPGDDAVEDD DLESKRRKME SAAIDAALMG KPNREPRVVV
401: QTVSEVDILD DGYRWRKYGQ KVVKGNPNPR SYYKCTNTGC PVRKHVERAS HDPKSVITTY EGKHNHEVPA SRNASHEMST PPMKPVVHPI NSNMQGLGGM
501: MRACEPRTFP NQYSQAAESD TISLDLGVGI SPNHSDATNQ LQSSVSDQMQ YQMQPMGSVY SNMGLPAMAM PTMAGNAASN IYGSREEKPS EGFTFKATPM
601: DHSANLCYST AGNLVMGP
001: MNPQANDRKE FQGDCSATGD LTAKHDSAGG NGGGGARYKL MSPAKLPISR STDITIPPGL SPTSFLESPV FISNIKPEPS PTTGSLFKPR PVHISASSSS
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP
Arabidopsis Description
WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.