Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400074158 | Potato | nucleus | 95.42 | 72.13 |
| Solyc07g047960.2.1 | Tomato | nucleus | 49.16 | 49.39 |
| VIT_12s0057g00550.t01 | Wine grape | nucleus | 37.59 | 38.71 |
| CDX93073 | Canola | nucleus | 30.12 | 33.97 |
| KRH74020 | Soybean | nucleus | 37.35 | 30.57 |
| GSMUA_Achr7P25840_001 | Banana | nucleus | 18.07 | 30.36 |
| CDY50038 | Canola | nucleus | 31.81 | 30.28 |
| Bra013187.1-P | Field mustard | nucleus | 32.29 | 29.98 |
| KRH14103 | Soybean | nucleus | 36.14 | 29.53 |
| AT2G04880.1 | Thale cress | nucleus | 32.29 | 27.52 |
| Solyc04g056360.2.1 | Tomato | nucleus | 25.54 | 26.43 |
| GSMUA_Achr4P13970_001 | Banana | nucleus | 29.4 | 23.78 |
| Solyc10g084380.1.1 | Tomato | nucleus | 24.1 | 23.7 |
| Solyc03g104810.2.1 | Tomato | nucleus | 27.23 | 23.25 |
| Solyc06g066370.2.1 | Tomato | nucleus | 29.16 | 22.62 |
| Solyc05g012770.2.1 | Tomato | nucleus | 27.47 | 22.44 |
| GSMUA_Achr3P29850_001 | Banana | nucleus | 31.08 | 22.4 |
| Solyc02g088340.2.1 | Tomato | nucleus | 24.82 | 22.39 |
| Solyc09g014990.2.1 | Tomato | nucleus | 27.71 | 21.74 |
| Solyc05g055750.2.1 | Tomato | nucleus | 23.86 | 21.57 |
| KXG36569 | Sorghum | nucleus | 29.88 | 20.29 |
| Solyc12g014610.1.1 | Tomato | nucleus | 29.88 | 20.29 |
| Zm00001d021947_P002 | Maize | nucleus | 29.64 | 20.07 |
| Os07t0583700-01 | Rice | nucleus | 29.64 | 19.9 |
| Zm00001d006702_P001 | Maize | nucleus | 29.16 | 19.84 |
| Solyc07g065260.2.1 | Tomato | nucleus | 27.95 | 19.46 |
| TraesCS2A01G189700.1 | Wheat | nucleus | 27.47 | 18.63 |
| TraesCS2B01G217400.2 | Wheat | nucleus | 27.47 | 18.57 |
| HORVU2Hr1G036320.1 | Barley | nucleus | 27.47 | 18.54 |
| Solyc07g005650.2.1 | Tomato | nucleus | 21.93 | 17.74 |
| TraesCS2D01G198100.4 | Wheat | nucleus | 27.23 | 17.71 |
| Solyc07g066220.2.1 | Tomato | nucleus | 28.67 | 16.1 |
| Solyc10g005680.1.1 | Tomato | nucleus | 25.06 | 14.79 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | UniProt:K4DBF4 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:Solyc12g006170.1 | EnsemblPlants:Solyc12g006170.1.1 |
| UniParc:UPI000276A638 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | : | : | : |
Description
No Description!
Coordinates
chr12:-:712968..715497
Molecular Weight (calculated)
46188.1 Da
IEP (calculated)
7.740
GRAVY (calculated)
-0.966
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVFVSQSDL QRVSYTIKRE KALDKLQPRR NPDTSAHGLT SDQGTTLLKA PEKPSEDGYN WRKYGQKLVK GNEFTRSYYK CTFPNCLAKK QVERSHDGHI
101: TDIHYIGKHE HPETLSVPQM SPEYVLPLQM KRPDIPIITA LEAEGEKSST PRETCEPSKP PEAPLALAIV SACDSVKVTP LKRYKLENEV DKGDSADSKK
201: QKKDTVATDD TPPVKSHSEP RHIVQTVSEV DIINDGQRWR KYGQKIVKGN PNPRSYYRCS VAGCPVKKHV ERASHDPKLV ITTYEGQHVH DFPTSRPISQ
301: ISVAPDAGTA GIREDSRTES GEKKHVVESK TESGEMKHIR ESKTEAGETK HVKESKAESG ENKHVGESKT ESDGNKHVEE SKPELVGNKH VGESISESGE
401: NKHVGLDMAV HIGAN
101: TDIHYIGKHE HPETLSVPQM SPEYVLPLQM KRPDIPIITA LEAEGEKSST PRETCEPSKP PEAPLALAIV SACDSVKVTP LKRYKLENEV DKGDSADSKK
201: QKKDTVATDD TPPVKSHSEP RHIVQTVSEV DIINDGQRWR KYGQKIVKGN PNPRSYYRCS VAGCPVKKHV ERASHDPKLV ITTYEGQHVH DFPTSRPISQ
301: ISVAPDAGTA GIREDSRTES GEKKHVVESK TESGEMKHIR ESKTEAGETK HVKESKAESG ENKHVGESKT ESDGNKHVEE SKPELVGNKH VGESISESGE
401: NKHVGLDMAV HIGAN
001: MILLPEPSPT TGSLFKPRPV HISASSSSYT GRGFHQNTFT EQKSSEFEFR PPASNMVYAE LGKIRSEPPV HFQGQGHGSS HSPSSISDAA GSSSELSRPT
101: PPCQMTPTSS DIPAGSDQEE SIQTSQNDSR GSTPSILADD GYNWRKYGQK HVKGSEFPRS YYKCTHPNCE VKKLFERSHD GQITDIIYKG THDHPKPQPG
201: RRNSGGMAAQ EERLDKYPSS TGRDEKGSGV YNLSNPNEQT GNPEVPPISA SDDGGEAAAS NRNKDEPDDD DPFSKRRRME GAMEITPLVK PIREPRVVVQ
301: TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTAHGCP VRKHVERASH DPKAVITTYE GKHDHDVPTS KSSSNHEIQP RFRPDETDTI SLNLGVGISS
401: DGPNHASNEH QHQNQQLVNQ THPNGVNFRF VHASPMSSYY ASLNSGMNQY GQRETKNETQ NGDISSLNNS SYPYPPNMGR VQSGP
101: PPCQMTPTSS DIPAGSDQEE SIQTSQNDSR GSTPSILADD GYNWRKYGQK HVKGSEFPRS YYKCTHPNCE VKKLFERSHD GQITDIIYKG THDHPKPQPG
201: RRNSGGMAAQ EERLDKYPSS TGRDEKGSGV YNLSNPNEQT GNPEVPPISA SDDGGEAAAS NRNKDEPDDD DPFSKRRRME GAMEITPLVK PIREPRVVVQ
301: TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTAHGCP VRKHVERASH DPKAVITTYE GKHDHDVPTS KSSSNHEIQP RFRPDETDTI SLNLGVGISS
401: DGPNHASNEH QHQNQQLVNQ THPNGVNFRF VHASPMSSYY ASLNSGMNQY GQRETKNETQ NGDISSLNNS SYPYPPNMGR VQSGP
Arabidopsis Description
WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.