Factsheet for Solyc07g066220.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc06g005170.2.1
Solyc08g014420.2.1
Solyc12g019460.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26440.1	Solyc08g014420.2.1	AT2G43790.1	24830428
AT4G26440.1	Solyc12g019460.1.1	AT2G43790.1	24830428
AT4G26440.1	Solyc06g005170.2.1	AT3G45640.1	24830428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400056952	Potato	nucleus	94.86	93.72
VIT_19s0015g01870.t01	Wine grape	nucleus	63.46	62.87
KRH62550	Soybean	nucleus	57.1	55.45
KRH56379	Soybean	nucleus	57.1	54.38
Bra028939.1-P	Field mustard	nucleus	26.66	43.88
CDY11947	Canola	nucleus	32.61	41.99
CDY36788	Canola	nucleus	35.32	41.83
GSMUA_Achr5P23900_001	Banana	nucleus	31.8	41.59
CDX94335	Canola	nucleus	28.42	40.86
Solyc06g066370.2.1	Tomato	nucleus	28.69	39.63
Bra002828.1-P	Field mustard	nucleus	35.99	39.52
CDY49388	Canola	nucleus	35.59	39.2
GSMUA_Achr6P03500_001	Banana	nucleus	27.06	38.84
CDX89336	Canola	nucleus	28.01	38.76
Bra026438.1-P	Field mustard	nucleus	28.01	38.76
AT5G56270.1	Thale cress	nucleus	35.99	38.72
Solyc09g014990.2.1	Tomato	nucleus	27.47	38.37
CDY69527	Canola	nucleus	27.47	37.38
CDY42736	Canola	nucleus	26.52	37.05
Bra019105.1-P	Field mustard	nucleus	26.52	37.05
GSMUA_Achr5P04150_001	Banana	nucleus	31.66	36.97
GSMUA_Achr11P...	Banana	nucleus	32.21	36.79
GSMUA_Achr4P01600_001	Banana	nucleus	33.02	36.64
AT4G26440.1	Thale cress	nucleus	28.01	36.44
CDY32799	Canola	nucleus	29.09	35.77
Solyc04g056360.2.1	Tomato	nucleus	19.08	35.16
Solyc05g012770.2.1	Tomato	nucleus	24.09	35.04
Solyc03g104810.2.1	Tomato	nucleus	22.19	33.74
Solyc05g055750.2.1	Tomato	nucleus	20.57	33.12
Solyc07g065260.2.1	Tomato	nucleus	26.12	32.38
Solyc12g014610.1.1	Tomato	nucleus	26.39	31.91
Solyc02g088340.2.1	Tomato	nucleus	19.76	31.74
Solyc07g047960.2.1	Tomato	nucleus	17.05	30.51
Solyc10g084380.1.1	Tomato	nucleus	16.64	29.15
Solyc12g006170.1.1	Tomato	nucleus	16.1	28.67
Solyc10g005680.1.1	Tomato	nucleus	23.14	24.32
Solyc07g005650.2.1	Tomato	nucleus	14.21	20.47

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:CAC36402.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF1	UniProt:Q9ARC7	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:Solyc07g066220.2
EnsemblPlants:Solyc07g066220.2.1	UniParc:UPI00000A24B3	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Probable WRKY transcription factor 2 [Source:Projected from Arabidopsis thaliana (AT5G56270) UniProtKB/Swiss-Prot;Acc:Q9FG77]

Coordinates

chr7:-:67694819..67700296

Molecular Weight (calculated)

79859.0 Da

IEP (calculated)

6.479

GRAVY (calculated)

-0.824

Length

739 amino acids

Sequence
(BLAST)

001: MGGFDDHVAI MGDWMPPSPS PRTFFSSLLG DDGGSRLSFD GTNETSGNLA SGPQEHVGNS DGVDTAPAAI SEPQPVKLSV PSDQKMNSRG GGLLERIAAR
101: AGFNAPKLNT ESLRPADLRQ NQGVRSPYLT IPPGLSPTTL LESPVFLSNS LVQPSPTTGK FLFSSGIDNR NSALMMEDTD KRKDNALESI NSSSFSFKPV
201: PETAPSLFPG TTSRSWLQVN PSNFSQQGFP NIEVSVHSQN SLVSHRVEAT QNPTQNGTLQ QSSDFPRFSA EKDVMANNVT LDSRTFQTVG SAVDHSPPLD
301: EPQDEDIDQR GGGDPNVAGA PAEDGYNWRK YGQKQVKGSE YPRSYYKCTH PTCPVKKKVE RSPEGHITEI IYKGAHNHPK PPPNRRSALG STNSLGDLQV
401: DGAEQGASGV NGDLGQANFH KAPGGGGGFD WRNNNRDANL GSEHCNRSAP FSAQNNTRLE SGDAVDVSSN FSNDEDEDDR GTHGSVSQGY EGEGDESESK
501: RRKLETYSAD MTGATRAIRE PRVVVQTTSE VDILDDGYRW RKYGQKVVKG NPNPRSYYKC TSAGCNVRKH VERASHDLKS VITTYEGKHN HDVPAARNSS
601: HVNSGASNTH PASVTAPAQN HLHRPEAAQL QNAMARFDRQ PSLGSFGLSG RPPQLGPNPG FSYGMNQQGG LSSLAMAGFH PNQNKPGEVP MHPYLGQPRP
701: MHDMGFMFPK EEPKVEPLSD PGPTAYQQFL NSLSLGPQM

Best Arabidopsis Sequence Match ( AT5G56270.1 )
(BLAST)

001: MAGFDENVAV MGEWVPRSPS PGTLFSSAIG EEKSSKRVLE RELSLNHGQV IGLEEDTSSN HNKDSSQSNV FRGGLSERIA ARAGFNAPRL NTENIRTNTD
101: FSIDSNLRSP CLTISSPGLS PATLLESPVF LSNPLAQPSP TTGKFPFLPG VNGNALSSEK AKDEFFDDIG ASFSFHPVSR SSSSFFQGTT EMMSVDYGNY
201: NNRSSSHQSA EEVKPGSENI ESSNLYGIET DNQNGQNKTS DVTTNTSLET VDHQEEEEEQ RRGDSMAGGA PAEDGYNWRK YGQKLVKGSE YPRSYYKCTN
301: PNCQVKKKVE RSREGHITEI IYKGAHNHLK PPPNRRSGMQ VDGTEQVEQQ QQQRDSAATW VSCNNTQQQG GSNENNVEEG STRFEYGNQS GSIQAQTGGQ
401: YESGDPVVVV DASSTFSNDE DEDDRGTHGS VSLGYDGGGG GGGGEGDESE SKRRKLEAFA AEMSGSTRAI REPRVVVQTT SDVDILDDGY RWRKYGQKVV
501: KGNPNPRSYY KCTAPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHGGGGDSG NGNSGGSAAV SHHYHNGHHS EPPRGRFDRQ VTTNNQSPFS
601: RPFSFQPHLG PPSGFSFGLG QTGLVNLSMP GLAYGQGKMP GLPHPYMTQP VGMSEAMMQR GMEPKVEPVS DSGQSVYNQI MSRLPQI

Arabidopsis Description

WRKY2Probable WRKY transcription factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG77]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.