Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019105.1-P | Field mustard | nucleus | 99.05 | 99.05 |
| CDY69527 | Canola | nucleus | 91.68 | 89.32 |
| CDX94335 | Canola | nucleus | 69.19 | 71.21 |
| CDX89336 | Canola | nucleus | 71.46 | 70.79 |
| AT4G26440.1 | Thale cress | nucleus | 72.02 | 67.08 |
| CDY05016 | Canola | nucleus | 23.82 | 39.5 |
| CDY14055 | Canola | nucleus | 23.06 | 38.24 |
| CDY29685 | Canola | nucleus | 24.95 | 37.71 |
| CDX97834 | Canola | nucleus | 25.33 | 37.12 |
| CDY11947 | Canola | nucleus | 39.7 | 36.59 |
| CDY10720 | Canola | nucleus | 25.71 | 36.46 |
| CDX84848 | Canola | nucleus | 25.71 | 35.98 |
| CDY36788 | Canola | nucleus | 41.97 | 35.58 |
| GSMUA_Achr5P23900_001 | Banana | nucleus | 38.0 | 35.58 |
| CDY24017 | Canola | nucleus | 25.33 | 35.45 |
| CDX91470 | Canola | nucleus, plastid | 31.38 | 34.87 |
| CDY65564 | Canola | nucleus, plastid | 31.0 | 34.82 |
| CDY07729 | Canola | nucleus | 30.43 | 34.04 |
| CDY49388 | Canola | nucleus | 42.91 | 33.83 |
| GSMUA_Achr6P03500_001 | Banana | nucleus | 32.89 | 33.79 |
| CDY69941 | Canola | nucleus, plastid | 30.25 | 33.54 |
| CDY18383 | Canola | nucleus, plastid | 30.43 | 33.47 |
| CDY14459 | Canola | nucleus, plastid | 30.81 | 33.27 |
| CDY02051 | Canola | nucleus | 17.39 | 33.21 |
| CDY53941 | Canola | nucleus | 27.22 | 32.73 |
| CDY36419 | Canola | nucleus | 27.41 | 31.87 |
| CDX98138 | Canola | nucleus | 27.41 | 31.73 |
| CDY72350 | Canola | nucleus | 8.7 | 31.72 |
| CDY33788 | Canola | nucleus | 26.28 | 31.45 |
| GSMUA_Achr4P01600_001 | Banana | nucleus | 39.51 | 31.38 |
| CDY62213 | Canola | nucleus | 27.41 | 31.25 |
| HORVU0Hr1G004890.10 | Barley | nucleus | 35.54 | 31.23 |
| GSMUA_Achr11P... | Banana | nucleus | 38.19 | 31.22 |
| GSMUA_Achr5P04150_001 | Banana | nucleus | 37.24 | 31.12 |
| CDX74281 | Canola | nucleus | 26.28 | 30.82 |
| CDX96873 | Canola | nucleus | 27.03 | 30.69 |
| CDY45169 | Canola | nucleus | 27.98 | 30.45 |
| CDY70490 | Canola | nucleus | 29.68 | 30.31 |
| HORVU7Hr1G049130.1 | Barley | nucleus, plastid | 13.99 | 30.2 |
| CDY16122 | Canola | nucleus | 25.52 | 30.13 |
| CDX89317 | Canola | nucleus | 30.25 | 29.96 |
| CDY03003 | Canola | nucleus | 27.6 | 29.86 |
| CDY32799 | Canola | nucleus | 33.84 | 29.78 |
| CDX94303 | Canola | nucleus | 29.87 | 29.7 |
| CDX97359 | Canola | nucleus | 29.68 | 29.24 |
| CDY37191 | Canola | nucleus | 26.84 | 29.22 |
| CDY48650 | Canola | nucleus, plastid | 24.2 | 28.89 |
| CDY14304 | Canola | nucleus | 29.87 | 28.88 |
| HORVU5Hr1G072020.1 | Barley | nucleus | 36.86 | 28.85 |
| CDX92808 | Canola | nucleus | 28.36 | 28.63 |
| CDY46692 | Canola | nucleus | 28.36 | 28.57 |
| TraesCS5A01G258100.1 | Wheat | nucleus | 36.48 | 28.51 |
| TraesCS5D01G266300.1 | Wheat | nucleus | 36.48 | 28.47 |
| TraesCS5B01G257300.1 | Wheat | nucleus | 36.48 | 28.42 |
| CDY62292 | Canola | nucleus | 11.15 | 28.37 |
| Zm00001d025669_P001 | Maize | nucleus | 35.16 | 28.05 |
| OQU80981 | Sorghum | nucleus | 36.29 | 28.03 |
| CDX93073 | Canola | nucleus | 19.47 | 27.99 |
| Os08t0499300-01 | Rice | nucleus | 35.54 | 27.89 |
| CDX74976 | Canola | nucleus | 20.98 | 27.89 |
| Zm00001d003331_P001 | Maize | nucleus | 36.67 | 27.6 |
| TraesCS2A01G330500.1 | Wheat | nucleus | 38.19 | 27.48 |
| CDX91348 | Canola | nucleus | 20.79 | 27.36 |
| TraesCS2D01G332300.1 | Wheat | nucleus | 37.81 | 27.21 |
| TraesCS2B01G351600.1 | Wheat | nucleus | 37.43 | 27.12 |
| TraesCS7D01G239800.2 | Wheat | nucleus | 32.14 | 27.07 |
| TraesCS7B01G136400.2 | Wheat | nucleus, plastid | 32.14 | 26.86 |
| VIT_19s0015g01870.t01 | Wine grape | nucleus | 37.81 | 26.81 |
| KXG26525 | Sorghum | nucleus | 37.43 | 26.76 |
| CDY62293 | Canola | nucleus | 10.21 | 26.6 |
| Solyc07g066220.2.1 | Tomato | nucleus | 37.05 | 26.52 |
| Zm00001d052847_P001 | Maize | nucleus | 36.29 | 26.34 |
| PGSC0003DMT400056952 | Potato | nucleus | 37.24 | 26.34 |
| TraesCS7A01G240800.1 | Wheat | nucleus | 31.76 | 25.81 |
| KRH62550 | Soybean | nucleus | 37.05 | 25.76 |
| CDY36463 | Canola | nucleus | 18.71 | 24.81 |
| KXG35872 | Sorghum | nucleus | 27.22 | 24.7 |
| KRH56379 | Soybean | nucleus | 36.11 | 24.61 |
| Zm00001d006001_P006 | Maize | nucleus | 26.65 | 24.56 |
| CDY50038 | Canola | nucleus | 20.04 | 24.31 |
| Zm00001d020881_P002 | Maize | nucleus | 26.65 | 23.94 |
| CDY08253 | Canola | nucleus | 18.53 | 23.56 |
| CDY26094 | Canola | nucleus | 18.53 | 23.56 |
| Os09t0481700-01 | Rice | nucleus | 28.17 | 23.54 |
| CDY10548 | Canola | nucleus | 18.9 | 23.2 |
| CDY59057 | Canola | nucleus | 18.9 | 22.37 |
| CDX79729 | Canola | nucleus | 13.61 | 22.36 |
| CDY46768 | Canola | nucleus | 13.61 | 22.29 |
| CDY46769 | Canola | nucleus | 13.61 | 22.29 |
| CDY47546 | Canola | nucleus | 16.45 | 22.14 |
| CDY47543 | Canola | nucleus | 11.72 | 21.91 |
| CDY23265 | Canola | nucleus | 18.9 | 21.88 |
| Os04t0471700-00 | Rice | nucleus | 37.43 | 19.84 |
| CDY67588 | Canola | nucleus | 18.53 | 18.99 |
| CDY54360 | Canola | nucleus | 19.09 | 18.17 |
| CDY13396 | Canola | nucleus | 17.77 | 17.7 |
| CDX72277 | Canola | nucleus | 18.71 | 13.51 |
| CDY52777 | Canola | nucleus, plastid | 4.16 | 12.87 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078HYH5 | UniProt:A0A078HYH5 | EnsemblPlants:CDY42736 | ProteinID:CDY42736 |
| ProteinID:CDY42736.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00075277001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF86 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE0B3D | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
Description
BnaA03g48030DBnaA03g48030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HYH5]
Coordinates
chrLK032533:+:34174..36017
Molecular Weight (calculated)
58300.8 Da
IEP (calculated)
6.014
GRAVY (calculated)
-0.703
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGFDNNFAV MGEWLDPSPN HKKRSKAELE REVYLEDIKN KGFLHASFQE KPCYSSNGLS ERIAARTGFK VQRLKTESIF PSRCLAISSP AVSPATLLES
101: PVFLSNPLTS PTTGKLSSLP SDKAKDEFND EIATSLALSL DPTTNIGSEP DDSQAYEQAH DSDLGDSMPS GSPEDDGYNW RKYGQKLVKG SEYPRSYYKC
201: THPNCEVKKK VERSREGHIT EIIYVKAHNH LKPPTKSRSG TGLSGTSNDM QIDGTGTNEN LQWTSPVSEE VGYGSHSGSM QVQSGAQFGY GGVATDAFSK
301: DEEDRTSYMS VSLGYHGQID ESEPKRRKLE TSGSTRGTRE PKVVVKTTSD IDILEDGYRW RKYGQKVVKG NPNPRSYYKC TANGCNVTKH VERASDDLTS
401: VLTTYIGKHN HAVPAARNSN PHVNYPMPHS SSEELVTANS SLHDFQPYLR SPSGFSVYYV GETELTDISM SGLPIEQERF LGLEALAIGD PDGLMLQLAA
501: EPKVEQVSQQ ELGLSRSSLI DIMSRLPQI
101: PVFLSNPLTS PTTGKLSSLP SDKAKDEFND EIATSLALSL DPTTNIGSEP DDSQAYEQAH DSDLGDSMPS GSPEDDGYNW RKYGQKLVKG SEYPRSYYKC
201: THPNCEVKKK VERSREGHIT EIIYVKAHNH LKPPTKSRSG TGLSGTSNDM QIDGTGTNEN LQWTSPVSEE VGYGSHSGSM QVQSGAQFGY GGVATDAFSK
301: DEEDRTSYMS VSLGYHGQID ESEPKRRKLE TSGSTRGTRE PKVVVKTTSD IDILEDGYRW RKYGQKVVKG NPNPRSYYKC TANGCNVTKH VERASDDLTS
401: VLTTYIGKHN HAVPAARNSN PHVNYPMPHS SSEELVTANS SLHDFQPYLR SPSGFSVYYV GETELTDISM SGLPIEQERF LGLEALAIGD PDGLMLQLAA
501: EPKVEQVSQQ ELGLSRSSLI DIMSRLPQI
001: MAGIDNKAAV MGEWFDCSTT NHRKRSKAEL GREFSLNYIK NEDSLQTTFQ ESSRGALRER IAARSGFNAP WLNTEDILQS KSLTISSPGL SPATLLESPV
101: FLSNPLLSPT TGKLSSVPSD KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG YNWRKYGQKL VKGSEYPRSY
201: YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
301: GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN
401: GCTVTKHVER ASDDFKSVLT TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF DFQSHLRHPT GFSVYIGQSE
501: LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV EPVSPQQGLD LSASSLICRE MLSRLRQI
101: FLSNPLLSPT TGKLSSVPSD KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG YNWRKYGQKL VKGSEYPRSY
201: YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
301: GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN
401: GCTVTKHVER ASDDFKSVLT TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF DFQSHLRHPT GFSVYIGQSE
501: LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV EPVSPQQGLD LSASSLICRE MLSRLRQI
Arabidopsis Description
WRKY34Probable WRKY transcription factor 34 [Source:UniProtKB/Swiss-Prot;Acc:O65590]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.