Factsheet for Zm00001d025669_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d028711_P003
Zm00001d036215_P003
Zm00001d045310_P003
Zm00001d047758_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26440.1	Zm00001d036215_P003	AT2G43790.1	24830428
AT4G26440.1	Zm00001d045310_P003	AT2G43790.1	24830428
AT4G26440.1	Zm00001d028711_P003	AT3G45640.1	24830428
AT4G26440.1	Zm00001d047758_P003	AT3G45640.1	24830428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003331_P001	Maize	nucleus	80.39	75.82
KXG26525	Sorghum	nucleus	84.31	75.54
HORVU0Hr1G004890.10	Barley	nucleus	55.51	61.13
TraesCS2B01G351600.1	Wheat	nucleus	64.4	58.49
TraesCS2D01G332300.1	Wheat	nucleus	64.25	57.96
TraesCS2A01G330500.1	Wheat	nucleus	63.8	57.55
GSMUA_Achr5P23900_001	Banana	nucleus	37.71	44.25
Bra028939.1-P	Field mustard	nucleus	28.21	41.65
GSMUA_Achr6P03500_001	Banana	nucleus	31.52	40.58
GSMUA_Achr4P01600_001	Banana	nucleus	39.97	39.79
CDY11947	Canola	nucleus	34.09	39.37
GSMUA_Achr11P...	Banana	nucleus	38.16	39.1
CDY36788	Canola	nucleus	36.65	38.94
GSMUA_Achr5P04150_001	Banana	nucleus	36.65	38.39
CDX94335	Canola	nucleus	28.96	37.35
Bra002828.1-P	Field mustard	nucleus	37.71	37.15
CDY49388	Canola	nucleus	37.56	37.11
Os04t0471700-00	Rice	nucleus	55.81	37.07
CDX89336	Canola	nucleus	29.41	36.52
Bra026438.1-P	Field mustard	nucleus	29.41	36.52
AT5G56270.1	Thale cress	nucleus	36.95	35.66
AT4G26440.1	Thale cress	nucleus	30.17	35.21
CDY42736	Canola	nucleus	28.05	35.16
Bra019105.1-P	Field mustard	nucleus	28.05	35.16
CDY69527	Canola	nucleus	28.51	34.81
Zm00001d038023_P001	Maize	nucleus	25.19	34.15
Zm00001d020881_P002	Maize	nucleus	30.32	34.13
Zm00001d006001_P006	Maize	nucleus	29.41	33.97
CDY32799	Canola	nucleus	30.62	33.78
Zm00001d010399_P001	Maize	nucleus	24.89	33.13
Zm00001d052847_P001	Maize	nucleus	35.44	32.24
Zm00001d041740_P001	Maize	nucleus	23.98	32.19
Zm00001d035323_P001	Maize	nucleus	23.83	31.85
Zm00001d043025_P001	Maize	nucleus	26.55	31.71
VIT_19s0015g01870.t01	Wine grape	nucleus	34.54	30.7
KRH62550	Soybean	nucleus	34.99	30.49
Zm00001d034084_P001	Maize	nucleus	19.31	30.05
Zm00001d021947_P002	Maize	nucleus	27.6	29.85
Zm00001d006702_P001	Maize	nucleus	27.45	29.84
Zm00001d038451_P001	Maize	nucleus	25.04	29.8
KRH56379	Soybean	nucleus	34.39	29.38
Zm00001d047309_P001	Maize	nucleus	21.87	29.18
Zm00001d012482_P001	Maize	nucleus	26.09	29.17
PGSC0003DMT400029328	Potato	nucleus	24.13	22.96
Zm00001d029564_P001	Maize	nucleus	12.67	22.28
Solyc10g005680.1.1	Tomato	nucleus	22.78	21.48
Zm00001d050023_P001	Maize	extracellular	17.35	20.32

Protein Annotations

EntrezGene:103641750	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A060D160	ProteinID:AQK44221.1	ProteinID:AQK44222.1
ProteinID:AQK44223.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	EMBL:KJ727736	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221
PANTHER:PTHR31221:SF86	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00049B0A0E	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
EnsemblPlantsGene:Zm00001d025669	EnsemblPlants:Zm00001d025669_P001	EnsemblPlants:Zm00001d025669_T001	SEG:seg	:	:

Description

WRKY-transcription factor 59Putative WRKY DNA-binding domain superfamily protein

Coordinates

chr10:-:125756452..125761237

Molecular Weight (calculated)

70632.0 Da

IEP (calculated)

7.096

GRAVY (calculated)

-0.710

Length

663 amino acids

Sequence
(BLAST)

001: MEGHVAMGWK DPNPGQESSM VFQSRAVRPD TVEGHSNEDV EAGFEKHGLS AALNSPQHEG RSLPLTPQFG QNSSPGSSLA ERMQARAGFK VPKLNMPFST
101: VAGDDSSVPG APSPYLTIPP GLSPATLLES PVFISNALGQ ASPTTGKLFL FGSTNDNDPI RPGGPPVGDG TDAFSFKPLD LKSSHYTAEV MKEQNTQSSV
201: KTEAKTQAVQ EANLLGQLNQ QNHDGQTNMN SDGARDSKLS RLASGTGAGN EHASPPDYGQ RAEEADARED YPAAMAVTAP AEDGYSWRKY GQKQVKHSEY
301: PRSYFKCTHP NCLVKKKVER SHEGHVTEII YKGTHNHPKP TQSRRPGAGA HPLGGGAQAD AADNLQGSQA NAAEANQAWR AGVQDGVDAT SPPSVPGELC
401: DSAASMQVDC AARFGSPEGA DVTSAVSDEV DGDDRVTLTH GGANAAEGDE LESKRRKLES YAIDMSTASR AVREPRVVIQ TTSEVDILDD GYRWRKYGQK
501: VVKGNPNPRS YYKCTQPGCT VRKHVERASH DLKAVITTYE GKHNHEVPAA RNSGHPSAAA APGAGGPRRQ EHPSVHDGLM RQHLGGCGVP FGLPPPPPPP
601: RDPLAPMRNY PTYGFTALGA GSTSLPSLPM LPVLAPSSLH QHPLLRHRQA VQAAGLAWRP RPT

Best Arabidopsis Sequence Match ( AT5G56270.1 )
(BLAST)

001: MAGFDENVAV MGEWVPRSPS PGTLFSSAIG EEKSSKRVLE RELSLNHGQV IGLEEDTSSN HNKDSSQSNV FRGGLSERIA ARAGFNAPRL NTENIRTNTD
101: FSIDSNLRSP CLTISSPGLS PATLLESPVF LSNPLAQPSP TTGKFPFLPG VNGNALSSEK AKDEFFDDIG ASFSFHPVSR SSSSFFQGTT EMMSVDYGNY
201: NNRSSSHQSA EEVKPGSENI ESSNLYGIET DNQNGQNKTS DVTTNTSLET VDHQEEEEEQ RRGDSMAGGA PAEDGYNWRK YGQKLVKGSE YPRSYYKCTN
301: PNCQVKKKVE RSREGHITEI IYKGAHNHLK PPPNRRSGMQ VDGTEQVEQQ QQQRDSAATW VSCNNTQQQG GSNENNVEEG STRFEYGNQS GSIQAQTGGQ
401: YESGDPVVVV DASSTFSNDE DEDDRGTHGS VSLGYDGGGG GGGGEGDESE SKRRKLEAFA AEMSGSTRAI REPRVVVQTT SDVDILDDGY RWRKYGQKVV
501: KGNPNPRSYY KCTAPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHGGGGDSG NGNSGGSAAV SHHYHNGHHS EPPRGRFDRQ VTTNNQSPFS
601: RPFSFQPHLG PPSGFSFGLG QTGLVNLSMP GLAYGQGKMP GLPHPYMTQP VGMSEAMMQR GMEPKVEPVS DSGQSVYNQI MSRLPQI

Arabidopsis Description

WRKY2Probable WRKY transcription factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG77]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.