Factsheet for Zm00001d035323_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041740_P001	Maize	nucleus	92.54	92.92
EES16036	Sorghum	nucleus	92.54	92.54
HORVU5Hr1G028340.1	Barley	nucleus	79.84	80.49
TraesCS5A01G104900.1	Wheat	nucleus	80.65	80.48
TraesCS5D01G116100.1	Wheat	nucleus	80.24	80.08
TraesCS5B01G108500.1	Wheat	nucleus	79.84	80.0
Os12t0507300-00	Rice	nucleus	61.29	76.19
GSMUA_Achr4P14270_001	Banana	nucleus	46.57	51.11
Zm00001d047309_P001	Maize	nucleus	49.19	49.09
GSMUA_Achr6P16760_001	Banana	nucleus	46.98	48.34
GSMUA_Achr7P26450_001	Banana	nucleus	46.57	48.33
GSMUA_Achr4P07230_001	Banana	nucleus	45.56	48.09
GSMUA_Achr10P...	Banana	nucleus	43.95	47.08
KRH44949	Soybean	nucleus	47.18	44.74
KRH01236	Soybean	nucleus	46.77	44.62
Zm00001d029564_P001	Maize	nucleus	33.47	44.03
VIT_14s0108g01280.t01	Wine grape	nucleus	46.77	44.02
AT3G01080.2	Thale cress	nucleus	38.71	41.65
CDX74281	Canola	nucleus	35.08	38.58
PGSC0003DMT400003637	Potato	nucleus	34.88	38.36
Solyc02g088340.2.1	Tomato	nucleus	35.28	38.04
Solyc03g104810.2.1	Tomato	nucleus	35.48	36.21
PGSC0003DMT400014220	Potato	nucleus	37.1	35.66
Zm00001d034084_P001	Maize	nucleus	27.62	32.16
Zm00001d038023_P001	Maize	nucleus	30.24	30.67
Zm00001d010399_P001	Maize	nucleus	30.65	30.52
Zm00001d043025_P001	Maize	nucleus	32.26	28.83
Zm00001d012482_P001	Maize	nucleus	31.45	26.31
Zm00001d038451_P001	Maize	nucleus	29.23	26.03
Zm00001d006702_P001	Maize	nucleus	30.65	24.92
Zm00001d021947_P002	Maize	nucleus	30.65	24.8
Zm00001d025669_P001	Maize	nucleus	31.85	23.83
Zm00001d050023_P001	Maize	extracellular	26.81	23.5
Zm00001d003331_P001	Maize	nucleus	32.06	22.62
Zm00001d006001_P006	Maize	nucleus	24.4	21.08
Zm00001d052847_P001	Maize	nucleus	30.44	20.71
Zm00001d020881_P002	Maize	nucleus	24.19	20.37

Protein Annotations

EntrezGene:100191937	MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:AQK78683.1	UniProt:B4FAQ8	EMBL:BT034196
EMBL:BT053811	EMBL:BT054822	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EMBL:KJ728532	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF55	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00017B61E1	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d035323	EnsemblPlants:Zm00001d035323_P001	EnsemblPlants:Zm00001d035323_T001	SEG:seg	:

Description

WRKY-transcription factor 62Probable WRKY transcription factor 4

Coordinates

chr6:-:21265695..21270357

Molecular Weight (calculated)

52621.8 Da

IEP (calculated)

7.934

GRAVY (calculated)

-0.770

Length

496 amino acids

Sequence
(BLAST)

001: MSARPPPQPR PRLALPPRST AESLFTGAGD TSPGPLTLAS ALFPSDADGG GGPGGASSSA AGAATFTQLL TGSLAPPPPP QQRHDAERGR GGGVARAGPA
101: LSVAPPASAS AGASVFTVPP GLSPSGLFDS PGLLFSPAMG GFGMSHQQAL AQVTAQATHS PLRMFDHLEQ PSFSTAATMS GALQHMNSAA SMAGISDMTM
201: ATANNENTSF QSAEASQRYQ VNAPVDKPAD DGYNWRKYGQ KVVKGSDCPR SYYKCTHPNC PVKKKVEHAE DGQISEIIYK GKHNHQRPPN KRAKDGNSSA
301: ADHNEQSNDT ASGLSAAKRD QDNIYGMSEQ ASGLSDGDDM DDGESRPHEV DDADNESKRR NIHISSQRTL SEPKIIVQTT SEVDLLDDGY RWRKYGQKVV
401: KGNPHPRSYY KCTFAGCNVR KHIERCSSDP KAVITTYEGK HNHEPPVGRG GNQNAGMSSQ QKGQNNVSSN QASFSRPDLS NANQMPIGIL QFKSEQ

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.