Factsheet for Os12t0507300-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16036	Sorghum	nucleus	77.19	62.1
Zm00001d041740_P001	Maize	nucleus	76.19	61.54
Zm00001d035323_P001	Maize	nucleus	76.19	61.29
TraesCS5B01G108500.1	Wheat	nucleus	75.44	60.81
HORVU5Hr1G028340.1	Barley	nucleus	74.94	60.77
TraesCS5A01G104900.1	Wheat	nucleus	75.44	60.56
TraesCS5D01G116100.1	Wheat	nucleus	75.19	60.36
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	37.84	40.48
GSMUA_Achr6P16760_001	Banana	nucleus	48.62	40.25
GSMUA_Achr4P14270_001	Banana	nucleus	45.36	40.04
GSMUA_Achr4P07230_001	Banana	nucleus	46.87	39.79
GSMUA_Achr10P...	Banana	nucleus	44.11	38.01
GSMUA_Achr7P26450_001	Banana	nucleus	44.11	36.82
VIT_14s0108g01280.t01	Wine grape	nucleus	47.12	35.67
KRH01236	Soybean	nucleus	46.37	35.58
KRH44949	Soybean	nucleus	46.62	35.56
CDX74281	Canola	nucleus	37.34	33.04
AT3G01080.2	Thale cress	nucleus	37.59	32.54
PGSC0003DMT400003637	Potato	nucleus	34.84	30.82
Solyc02g088340.2.1	Tomato	nucleus	35.34	30.65
Os07t0596900-00	Rice	nucleus	33.08	30.56
Os03t0758950-01	Rice	nucleus, plastid	32.58	29.61
Solyc03g104810.2.1	Tomato	nucleus	35.09	28.81
PGSC0003DMT400014220	Potato	nucleus	36.84	28.49
Os05t0343400-01	Rice	nucleus	30.83	25.26
Os01t0826400-01	Rice	extracellular	34.59	24.86
Os05t0474800-01	Rice	nucleus	33.83	23.6
Os07t0583700-01	Rice	nucleus	33.33	21.52
Os08t0499300-01	Rice	nucleus	32.83	19.44
Os08t0276200-01	Rice	cytosol, nucleus, plastid	15.54	16.94
Os09t0481700-01	Rice	nucleus	23.31	14.69
Os04t0471700-00	Rice	nucleus	33.58	13.43
Os03t0758900-01	Rice	plastid	0.75	0.74

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:B9GDC1	ProteinID:BAT17299.1	ProteinID:EEE53278.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
EnsemblPlantsGene:Os12g0507300	EnsemblPlants:Os12t0507300-00	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF55
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000193581A	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

WRKY GENE 96Similar to WRKY DNA binding domain containing protein, expressed. (Os12t0507300-00)

Coordinates

chr12:+:19474766..19478135

Molecular Weight (calculated)

44253.3 Da

IEP (calculated)

7.675

GRAVY (calculated)

-0.969

Length

399 amino acids

Sequence
(BLAST)

001: MASRESLPTR LQREFDAFDV LDMFIPDKIL PKRATRIKGG FGMSHREALA QVTAQASHSP LRMFDHTEQP SFSAAPTSSE AMQHMNAAVN MTGISDMVMG
101: PTNNENVAFQ PAEASQRYQV NAPVDKPADD GYNWRKYGQK VVKGSDCPRS YYKCTHPNCP VKKKVEHAED GQISEIIYKG KHNHQRPPNK RAKDGSSSAA
201: DQNEQSNDTV SGLSGIKRDQ EAIYGMSEQL SGLSEGDDMD DGESRPHEAD DKESDSKKRN IQISSQRTSA EAKIIVQTTS EVDLLDDGYR WRKYGQKVVK
301: GNPHPRSYYK CTYAGCNVRK HIERASSDPK AVITTYEGKH NHEPPVGRGN NQNAGNAAPS SSAQQNMQNL SSNQASLTMA DFNNINQRPI GVLQFKSEE

Best Arabidopsis Sequence Match ( AT2G03340.1 )
(BLAST)

001: MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS NLFSDPDEFK SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT

Arabidopsis Description

WRKY3Putative WRKY DNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WPM8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.