Factsheet for Os05t0474800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 5
nucleus 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0539500-01
Os04t0417600-00
Os08t0102900-00
Os10t0533600-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38470.1	Os02t0539500-01	AT3G18690.1	15990873
AT2G38470.1	Os04t0417600-00	AT3G18690.1	15990873
AT2G38470.1	Os08t0102900-00	AT3G18690.1	15990873
AT2G38470.1	Os02t0539500-01	AT3G18690.1	18650934
AT2G38470.1	Os04t0417600-00	AT3G18690.1	18650934
AT2G38470.1	Os08t0102900-00	AT3G18690.1	18650934
AT2G38470.1	Os02t0539500-01	AT3G18690.1	21203436
AT2G38470.1	Os04t0417600-00	AT3G18690.1	21203436
AT2G38470.1	Os08t0102900-00	AT3G18690.1	21203436
AT2G38470.1	Os10t0533600-01	AT4G01370.1	18650934

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G070250.2	Barley	nucleus, plastid	57.17	63.87
TraesCS1D01G292700.1	Wheat	nucleus, plastid	56.47	63.71
TraesCS1A01G298600.1	Wheat	nucleus, plastid	56.12	63.56
TraesCS1B01G308200.1	Wheat	nucleus, plastid	55.94	62.87
Os01t0826400-01	Rice	extracellular	55.59	57.3
OQU78174	Sorghum	nucleus	62.59	55.16
Zm00001d038451_P001	Maize	nucleus	52.45	53.86
GSMUA_Achr3P09940_001	Banana	nucleus	31.82	49.73
Bra005104.1-P	Field mustard	nucleus	36.54	45.73
CDY07729	Canola	nucleus	37.06	44.82
Bra017117.1-P	Field mustard	nucleus	36.19	44.71
Bra000064.1-P	Field mustard	nucleus	36.71	44.4
CDY65564	Canola	nucleus, plastid	36.54	44.37
CDX91470	Canola	nucleus, plastid	36.89	44.33
KRH72765	Soybean	nucleus	44.93	44.31
KRG98195	Soybean	nucleus	41.78	44.1
KRH17125	Soybean	nucleus	44.23	44.0
CDY69941	Canola	nucleus, plastid	36.54	43.82
CDY18383	Canola	nucleus, plastid	36.71	43.66
GSMUA_Achr6P32720_001	Banana	nucleus	34.79	43.64
CDY14459	Canola	nucleus, plastid	37.24	43.47
Os05t0343400-01	Rice	nucleus	36.89	43.33
KRH30155	Soybean	nucleus	41.26	43.07
PGSC0003DMT400043204	Potato	nucleus	40.03	42.88
VIT_06s0004g07500.t01	Wine grape	nucleus	44.93	42.62
Solyc06g066370.2.1	Tomato	nucleus	39.51	42.24
AT2G38470.1	Thale cress	nucleus, plastid	37.76	41.62
CDY48650	Canola	nucleus, plastid	30.24	39.05
GSMUA_Achr8P01790_001	Banana	nucleus	36.36	36.49
Os12t0507300-00	Rice	nucleus	23.6	33.83
Os07t0596900-00	Rice	nucleus	22.73	30.09
Os03t0758950-01	Rice	nucleus, plastid	21.68	28.25
Os07t0583700-01	Rice	nucleus	29.72	27.51
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	17.48	26.81
Os08t0499300-01	Rice	nucleus	30.77	26.11
Os09t0481700-01	Rice	nucleus	23.6	21.33
Os04t0471700-00	Rice	nucleus	28.85	16.53
Os08t0276200-01	Rice	cytosol, nucleus, plastid	9.79	15.3
Os03t0758900-01	Rice	plastid	0.52	0.74

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	MapMan:26.8.3.3.1	EntrezGene:4339092	ProteinID:AAU44246.1	ProteinID:BAF17742.1
ProteinID:BAS94520.1	EMBL:DQ298184	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlantsGene:Os05g0474800	EnsemblPlants:Os05t0474800-01	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF76	UniProt:Q65WW1	SMART:SM00774	SUPFAM:SSF118290
UniParc:UPI00003B3197	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_015637836.1	SEG:seg	:

Description

WRKY GENE 70WRKY transcription factor 70. (Os05t0474800-01)

Coordinates

chr5:-:23310508..23313449

Molecular Weight (calculated)

59655.4 Da

IEP (calculated)

5.502

GRAVY (calculated)

-0.566

Length

572 amino acids

Sequence
(BLAST)

001: MTAAPGSLPL VNSRPVSLSL AASRSSFSSL LSGGAGSSLN LMTPPSSLPP SSPSSYFGGV SSSGFLDSPI LLTPSLFPSP TTTGALFSWI TTATATAAIA
101: PESQVQGGVK DEQQQYSDFT FLPTASTAPA TTMAGATATT SNSFMQDSML MAPLGGDPYN GEQQQPWSYQ EPTMDADTRP AEFTSSAAAG DVAGNGSYSQ
201: VAAPAAAGGF RQQSRRSSDD GYNWRKYGQK QMKGSENPRS YYKCTFPGCP TKKKVEQSPD GQVTEIVYKG AHSHPKPPQN GRGRGGSGYA LHGGAASDAY
301: SSADALSGTP VATPENSSAS FGDDEAVNGV SSSLRVASSV GGGEDLDDDE PDSKRWRRDG GDGEGVSLVA GNRTVREPRV VVQTMSDIDI LDDGYRWRKY
401: GQKVVKGNPN PRSYYKCTTA GCPVRKHVER ASNDLRAVIT TYEGKHNHDV PAARGSAAAA LYRATPPPQA SNAGMMPTTA QPSSYLQGGG GVLPAGGYGA
501: SYGGAPTTTQ PANGGGFAAL SGRFDDDATG ASYSYTSQQQ QQPNDAVYYA SRAKDEPRDD GIMSFFEQPL LF

Best Arabidopsis Sequence Match ( AT2G38470.1 )
(BLAST)

001: MAASFLTMDN SRTRQNMNGS ANWSQQSGRT STSSLEDLEI PKFRSFAPSS ISISPSLVSP STCFSPSLFL DSPAFVSSSA NVLASPTTGA LITNVTNQKG
101: INEGDKSNNN NFNLFDFSFH TQSSGVSAPT TTTTTTTTTT TTNSSIFQSQ EQQKKNQSEQ WSQTETRPNN QAVSYNGREQ RKGEDGYNWR KYGQKQVKGS
201: ENPRSYYKCT FPNCPTKKKV ERSLEGQITE IVYKGSHNHP KPQSTRRSSS SSSTFHSAVY NASLDHNRQA SSDQPNSNNS FHQSDSFGMQ QEDNTTSDSV
301: GDDEFEQGSS IVSRDEEDCG SEPEAKRWKG DNETNGGNGG GSKTVREPRI VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTI GCPVRKHVER
401: ASHDMRAVIT TYEGKHNHDV PAARGSGYAT NRAPQDSSSV PIRPAAIAGH SNYTTSSQAP YTLQMLHNNN TNTGPFGYAM NNNNNNSNLQ TQQNFVGGGF
501: SRAKEEPNEE TSFFDSFMP

Arabidopsis Description

WRKY33WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.