Factsheet for GSMUA_Achr6P32720_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr6P13020_001
GSMUA_Achr7P03200_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38470.1	GSMUA_Achr10P...	AT3G18690.1	15990873
AT2G38470.1	GSMUA_Achr6P13020_001	AT3G18690.1	15990873
AT2G38470.1	GSMUA_Achr7P03200_001	AT3G18690.1	15990873
AT2G38470.1	GSMUA_Achr10P...	AT3G18690.1	18650934
AT2G38470.1	GSMUA_Achr6P13020_001	AT3G18690.1	18650934
AT2G38470.1	GSMUA_Achr7P03200_001	AT3G18690.1	18650934
AT2G38470.1	GSMUA_Achr10P...	AT3G18690.1	21203436
AT2G38470.1	GSMUA_Achr6P13020_001	AT3G18690.1	21203436
AT2G38470.1	GSMUA_Achr7P03200_001	AT3G18690.1	21203436

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P09940_001	Banana	nucleus	39.04	48.63
KRH17125	Soybean	nucleus	57.46	45.57
KRH72765	Soybean	nucleus	57.68	45.34
VIT_06s0004g07500.t01	Wine grape	nucleus	59.87	45.27
PGSC0003DMT400043204	Potato	nucleus	52.41	44.76
Solyc06g066370.2.1	Tomato	nucleus	52.41	44.67
GSMUA_Achr11P...	Banana	nucleus	45.39	44.42
KRG98195	Soybean	nucleus	50.66	42.62
KRH30155	Soybean	nucleus	50.88	42.34
Bra005104.1-P	Field mustard	nucleus	41.23	41.14
CDY65564	Canola	nucleus, plastid	41.89	40.55
Os01t0826400-01	Rice	extracellular	49.34	40.54
CDX91470	Canola	nucleus, plastid	42.11	40.34
CDY07729	Canola	nucleus	41.67	40.17
Bra000064.1-P	Field mustard	nucleus	41.67	40.17
Bra017117.1-P	Field mustard	nucleus	40.57	39.96
Zm00001d043025_P001	Maize	nucleus	48.25	39.64
CDY69941	Canola	nucleus, plastid	41.23	39.41
TraesCS3D01G341100.1	Wheat	nucleus	48.25	39.22
TraesCS3B01G379200.1	Wheat	nucleus	48.03	39.18
CDY18383	Canola	nucleus, plastid	41.23	39.09
CDY14459	Canola	nucleus, plastid	41.89	38.98
TraesCS3A01G347500.1	Wheat	nucleus	47.59	38.61
KXG33637	Sorghum	nucleus	46.93	38.49
GSMUA_Achr8P01790_001	Banana	nucleus	47.81	38.25
CDY48650	Canola	nucleus, plastid	36.84	37.92
HORVU3Hr1G088200.4	Barley	nucleus, plastid	48.25	36.73
Zm00001d012482_P001	Maize	nucleus	47.15	36.26
AT2G38470.1	Thale cress	nucleus, plastid	41.23	36.22
Zm00001d038451_P001	Maize	nucleus	44.08	36.09
TraesCS1A01G298600.1	Wheat	nucleus, plastid	39.69	35.84
TraesCS1B01G308200.1	Wheat	nucleus, plastid	39.91	35.76
HORVU1Hr1G070250.2	Barley	nucleus, plastid	40.13	35.74
TraesCS1D01G292700.1	Wheat	nucleus, plastid	39.47	35.5
Os05t0474800-01	Rice	nucleus	43.64	34.79
GSMUA_Achr7P25840_001	Banana	nucleus	17.98	33.2
OQU78174	Sorghum	nucleus	43.86	30.82
GSMUA_Achr4P14270_001	Banana	nucleus	30.26	30.53
GSMUA_Achr10P...	Banana	nucleus	30.26	29.81
GSMUA_Achr4P07230_001	Banana	nucleus	30.04	29.15
GSMUA_Achr4P13970_001	Banana	nucleus	32.46	28.85
GSMUA_Achr7P00610_001	Banana	nucleus	29.82	28.22
GSMUA_Achr6P16760_001	Banana	nucleus	29.61	28.01
GSMUA_Achr5P23900_001	Banana	nucleus	33.99	27.43
GSMUA_Achr7P26450_001	Banana	nucleus	28.51	27.2
GSMUA_Achr6P03500_001	Banana	nucleus	30.7	27.18
GSMUA_Achr5P04150_001	Banana	nucleus	36.84	26.54
GSMUA_AchrUn_...	Banana	nucleus	26.1	25.98
GSMUA_Achr4P01600_001	Banana	nucleus	37.94	25.98
GSMUA_Achr11P...	Banana	nucleus	36.84	25.97
GSMUA_Achr3P29850_001	Banana	nucleus	32.24	25.52
GSMUA_Achr1P17160_001	Banana	nucleus	22.59	25.06
GSMUA_Achr4P16840_001	Banana	nucleus	21.93	23.75
GSMUA_Achr10P...	Banana	nucleus	23.46	22.62
GSMUA_Achr9P19580_001	Banana	nucleus	24.56	20.07

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	MapMan:26.8.3.3.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr6G32720_001	EnsemblPlants:GSMUA_Achr6P32720_001	EnsemblPlants:GSMUA_Achr6T32720_001	InterPro:IPR003657
InterPro:IPR036576	UniProt:M0TC66	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF76
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002965D2E	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

Putative Probable WRKY transcription factor 33 [Source:GMGC_GENE;Acc:GSMUA_Achr6G32720_001]

Coordinates

chr6:+:31989012..31991569

Molecular Weight (calculated)

48373.9 Da

IEP (calculated)

8.129

GRAVY (calculated)

-0.689

Length

456 amino acids

Sequence
(BLAST)

001: MASPAGSFDT SANSTPPAAF TFSSPYASFS DLLAGGGGDD GGGGGGRSLS RDFAGTGGGG VPKFKSAPPP SLPISRPPIS PSSCFAIPAG LSPAELLDSP
101: VLLSSANILA SPTTGTFPAQ ALNLRIASAA CRPENKDGTR ASSDFSFQTI ANPRSFLPAL VRSPERPRAL EAPRCRQSRL RVLDDGYNWR KYGQKQITEI
201: VYKGTHNHPK PQANRRSSSA AAQAIQGPVP SEASENSFGG RSGTPLDSVP TPDDSSVSFG DDDVDMSSQR SNQGGDDYEE DEPDAKRWKA EGESEGLSAA
301: GNRTVREPRV VVQTQSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTM GCPVRKHVER ASHDLRSVIT TYEGKHNHDV PAARGSGGGG GGAHLLARPQ
401: PENNGMAAAI RPSVMANHAN PNNVFRGRPG ASETQMFPNK TKEEQKEDSF LDSLLC

Best Arabidopsis Sequence Match ( AT2G38470.1 )
(BLAST)

001: MAASFLTMDN SRTRQNMNGS ANWSQQSGRT STSSLEDLEI PKFRSFAPSS ISISPSLVSP STCFSPSLFL DSPAFVSSSA NVLASPTTGA LITNVTNQKG
101: INEGDKSNNN NFNLFDFSFH TQSSGVSAPT TTTTTTTTTT TTNSSIFQSQ EQQKKNQSEQ WSQTETRPNN QAVSYNGREQ RKGEDGYNWR KYGQKQVKGS
201: ENPRSYYKCT FPNCPTKKKV ERSLEGQITE IVYKGSHNHP KPQSTRRSSS SSSTFHSAVY NASLDHNRQA SSDQPNSNNS FHQSDSFGMQ QEDNTTSDSV
301: GDDEFEQGSS IVSRDEEDCG SEPEAKRWKG DNETNGGNGG GSKTVREPRI VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTI GCPVRKHVER
401: ASHDMRAVIT TYEGKHNHDV PAARGSGYAT NRAPQDSSSV PIRPAAIAGH SNYTTSSQAP YTLQMLHNNN TNTGPFGYAM NNNNNNSNLQ TQQNFVGGGF
501: SRAKEEPNEE TSFFDSFMP

Arabidopsis Description

WRKY33WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.