Factsheet for GSMUA_Achr7P00610_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	46.47	48.38
GSMUA_Achr4P14270_001	Banana	nucleus	45.23	48.23
GSMUA_Achr4P07230_001	Banana	nucleus	46.89	48.09
GSMUA_Achr7P26450_001	Banana	nucleus	46.27	46.65
KRH01236	Soybean	nucleus	49.59	45.96
GSMUA_Achr6P16760_001	Banana	nucleus	45.85	45.85
VIT_14s0108g01280.t01	Wine grape	nucleus	50.0	45.73
KRH44949	Soybean	nucleus	49.59	45.7
AT3G01080.2	Thale cress	nucleus	40.66	42.52
CDX74281	Canola	nucleus	38.59	41.24
PGSC0003DMT400003637	Potato	nucleus	35.27	37.69
GSMUA_Achr3P09940_001	Banana	nucleus	28.42	37.43
Solyc02g088340.2.1	Tomato	nucleus	35.48	37.17
GSMUA_Achr7P25840_001	Banana	nucleus	18.88	36.84
Solyc03g104810.2.1	Tomato	nucleus	35.06	34.77
PGSC0003DMT400014220	Potato	nucleus	36.72	34.3
GSMUA_Achr11P...	Banana	nucleus	30.91	31.97
GSMUA_Achr1P17160_001	Banana	nucleus	26.56	31.14
GSMUA_Achr4P13970_001	Banana	nucleus	32.37	30.41
GSMUA_Achr6P32720_001	Banana	nucleus	28.22	29.82
GSMUA_Achr6P03500_001	Banana	nucleus	31.33	29.32
GSMUA_Achr5P23900_001	Banana	nucleus	33.2	28.32
GSMUA_Achr8P01790_001	Banana	nucleus	33.2	28.07
GSMUA_AchrUn_...	Banana	nucleus	26.35	27.73
GSMUA_Achr10P...	Banana	nucleus	27.18	27.7
GSMUA_Achr4P16840_001	Banana	nucleus	24.07	27.55
GSMUA_Achr5P04150_001	Banana	nucleus	33.61	25.59
GSMUA_Achr3P29850_001	Banana	nucleus	30.5	25.52
GSMUA_Achr11P...	Banana	nucleus	34.23	25.5
GSMUA_Achr4P01600_001	Banana	nucleus	34.65	25.08
GSMUA_Achr9P19580_001	Banana	nucleus	27.18	23.48

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr7G00610_001	EnsemblPlants:GSMUA_Achr7P00610_001	EnsemblPlants:GSMUA_Achr7T00610_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0TDK1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF84	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000295BFE7	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Putative Probable WRKY transcription factor 3 [Source:GMGC_GENE;Acc:GSMUA_Achr7G00610_001]

Coordinates

chr7:+:512495..515793

Molecular Weight (calculated)

52845.3 Da

IEP (calculated)

9.078

GRAVY (calculated)

-0.844

Length

482 amino acids

Sequence
(BLAST)

001: MAEPQGGAQR PPPRPAIALP SRSSMESLFR PADVSPGLSS LLADPDLEYP SFSQLLAGAI GPLALGQSRP VNLTATRLPL ITFPSGISPS SLFQSPPSLF
101: SPAQGQYGIL NQQNQPQATV QAARSHAYDP TSYSSTLSAA PATTAVASLR HLPTPFNLSS AQQMPQYNST SESAHGDRRS QPSTLVVDKP ADDGYNWRKY
201: GQKQVKGGEY PRSYYKCTHQ KCPVKKKVER SFDGQVTEIV YKGQHNHQPP QQNRHAKEGG SLASGSNGSK PEPASQGLYE SFGKSSETTY KRNLESDHDS
301: SKYISDSSDD EEAGEIAMRT DELDENQPDL KRRKMDIRNN QSASYCTVTE PKVIFQTTSE VDLLDDGYRW RKYGQKVVKG NPHPRSYYKC TNSGCNVRKH
401: VERASTDPKA VITTYEGKHN HDVPAARSSN HSMLNANASA SIISPNTLHN YSRNQISLGS TDLGHNIERP VAIQLKKERD GV

Best Arabidopsis Sequence Match ( AT1G13960.2 )
(BLAST)

001: MTHQQALAQV TAQAVQANAN MQPQTEYPPP SQVQSFSSGQ AQIPTSAPLP AQRETSDVTI IEHRSQQPLN VDKPADDGYN WRKYGQKQVK GSEFPRSYYK
101: CTNPGCPVKK KVERSLDGQV TEIIYKGQHN HEPPQNTKRG NKDNTANING SSINNNRGSS ELGASQFQTN SSNKTKREQH EAVSQATTTE HLSEASDGEE
201: VGNGETDVRE KDENEPDPKR RSTEVRISEP APAASHRTVT EPRIIVQTTS EVDLLDDGYR WRKYGQKVVK GNPYPRSYYK CTTPGCGVRK HVERAATDPK
301: AVVTTYEGKH NHDLPAAKSS SHAAAAAQLR PDNRPGGLAN LNQQQQQQPV ARLRLKEEQT T

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.