Factsheet for GSMUA_Achr10P06060_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P19580_001	Banana	nucleus	72.52	61.47
GSMUA_AchrUn_...	Banana	nucleus	54.33	56.11
PGSC0003DMT400029069	Potato	mitochondrion	10.15	39.34
TraesCS7D01G287200.1	Wheat	nucleus	42.49	38.51
TraesCS7A01G294800.2	Wheat	nucleus	42.49	38.51
TraesCS7B01G185400.2	Wheat	nucleus	42.07	38.12
Zm00001d050023_P001	Maize	extracellular	44.4	37.1
EES14907	Sorghum	nucleus	44.4	36.91
HORVU7Hr1G066670.4	Barley	nucleus	42.28	34.48
VIT_04s0008g06600.t01	Wine grape	nucleus	34.04	32.79
Os08t0276200-01	Rice	cytosol, nucleus, plastid	23.26	30.05
GSMUA_Achr4P07230_001	Banana	nucleus	29.81	30.0
GSMUA_Achr7P26450_001	Banana	nucleus	30.02	29.71
GSMUA_Achr4P14270_001	Banana	nucleus	27.91	29.2
GSMUA_Achr10P...	Banana	nucleus	28.54	29.16
VIT_11s0037g00150.t01	Wine grape	nucleus	30.66	29.06
GSMUA_Achr3P09940_001	Banana	nucleus	22.41	28.96
GSMUA_Achr6P16760_001	Banana	nucleus	28.96	28.42
CDY36463	Canola	nucleus	23.89	28.32
KRH26105	Soybean	nucleus	27.7	28.05
GSMUA_Achr7P25840_001	Banana	nucleus	14.59	27.94
KRH54934	Soybean	nucleus	27.27	27.45
GSMUA_Achr7P00610_001	Banana	nucleus	27.7	27.18
Bra010266.1-P	Field mustard	nucleus	25.16	26.04
CDY23265	Canola	nucleus	24.31	25.16
AT4G30935.1	Thale cress	nucleus	24.74	25.11
GSMUA_Achr11P...	Banana	nucleus	24.52	24.89
Solyc07g005650.2.1	Tomato	nucleus	26.85	24.76
GSMUA_Achr1P17160_001	Banana	nucleus	20.72	23.84
GSMUA_Achr4P13970_001	Banana	nucleus	25.79	23.78
GSMUA_Achr6P32720_001	Banana	nucleus	22.62	23.46
KRH72303	Soybean	nucleus	25.58	22.7
CDY13396	Canola	nucleus	23.89	21.28
GSMUA_Achr4P16840_001	Banana	nucleus	18.6	20.9
GSMUA_Achr8P01790_001	Banana	nucleus	24.52	20.35
GSMUA_Achr6P03500_001	Banana	nucleus	21.78	20.0
GSMUA_Achr3P29850_001	Banana	nucleus	24.31	19.97
GSMUA_Achr5P23900_001	Banana	nucleus	22.83	19.11
Bra024035.1-P	Field mustard	nucleus	23.47	18.85
GSMUA_Achr11P...	Banana	nucleus	25.58	18.7
GSMUA_Achr5P04150_001	Banana	nucleus	24.74	18.48
GSMUA_Achr4P01600_001	Banana	nucleus	24.31	17.27
CDX72277	Canola	nucleus	25.58	16.51

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr10G06060_001	EnsemblPlants:GSMUA_Achr10P06060_001	EnsemblPlants:GSMUA_Achr10T06060_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0RFT3	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF29	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000296B0D5	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Putative Probable WRKY transcription factor 4 [Source:GMGC_GENE;Acc:GSMUA_Achr10G06060_001]

Coordinates

chr10:+:16537394..16542229

Molecular Weight (calculated)

50473.3 Da

IEP (calculated)

6.571

GRAVY (calculated)

-0.705

Length

473 amino acids

Sequence
(BLAST)

001: MAEEKASLAG TESARASSSS VEEEHSLPDP VAAVEGGGPE ASPSPSPSPA NADGRSFSQL LAGAMASPAA SPRPAPIVTV PVVAVPCFLA PAALVESQGF
101: SGQFAMTHQA VLATVTAQAQ MQAQAACPSS SNSVTNSFPQ PLLSTVSPMP LQQLPPQTPK KTPGDVYNWR KYGQKQVKSS DNARSYYRCT DSNCSAKKKV
201: EHCPDGTVVE VIYRGKHNHD PPQKHRYTRD RGAQSSGPPV ENESLDNPST EPDESDPSTC KAEQNSNNET PKQQLLSENS KSSSAPILKT IREYIVQTEI
301: DVRHLSDGYK WRKYGQKMVK GNHNPRSYYR CTHSGCPVRK HVERVSHDAK ALLITYEGEH NHDQPTSKPA SDPPLTTSQS NVAAGMSSEQ LSTSNSLSVE
401: QSSKESCQNI VVEEVAGDKK LELGGDGALE SAQALLSIGF SSSSTEGTGR NNSESMKSPI LTENRAAASV QNT

Best Arabidopsis Sequence Match ( AT4G30935.1 )
(BLAST)

001: MEEDTGIDEA KTYTVEKSEK VEPEKDGLSQ FRDEEKSLGA DMEDLHDETV RETLGKDQVQ GVRENSSVEP NVEDVLEVNE TDSVKETVVS AIVPVDEVEE
101: NRQVETSPSL AASSDSLTVT PCLSLDPATA STAQDLPLVS VPTKQEQRSD SPVVNRLSVT PVPRTPARDG YNWRKYGQKQ VKSPKGSRSY YRCTYTECCA
201: KKIECSNDSG NVVEIVNKGL HTHEPPRKTS FSPREIRVTT AIRPVSEDDT VVEELSIVPS GSDPSASTKE YICESQTLVD RKRHCENEAV EEPEPKRRLK
301: KDNSQSSDSV SKPGKKNKFV VHAAGDVGIC GDGYRWRKYG QKMVKGNPHP RNYYRCTSAG CPVRKHIETA VENTKAVIIT YKGVHNHDMP VPKKRHGPPS
401: SMLVAAAAPT SMRTRTDDQV NIPTSSQCSV GRESEKQSKE ALDVGGEKVM ESARTLLSIG FEIKQC

Arabidopsis Description

WRKY32Probable WRKY transcription factor 32 [Source:UniProtKB/Swiss-Prot;Acc:P59583]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.