Factsheet for GSMUA_Achr9P19580_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	61.47	72.52
GSMUA_AchrUn_...	Banana	nucleus	48.75	59.39
TraesCS7A01G294800.2	Wheat	nucleus	38.89	41.57
TraesCS7D01G287200.1	Wheat	nucleus	38.53	41.19
TraesCS7B01G185400.2	Wheat	nucleus	38.53	41.19
EES14907	Sorghum	nucleus	40.14	39.37
Zm00001d050023_P001	Maize	extracellular	38.53	37.99
HORVU7Hr1G066670.4	Barley	nucleus	39.25	37.76
PGSC0003DMT400029069	Potato	mitochondrion	7.71	35.25
Os08t0276200-01	Rice	cytosol, nucleus, plastid	22.58	34.43
VIT_04s0008g06600.t01	Wine grape	nucleus	29.93	34.01
GSMUA_Achr7P26450_001	Banana	nucleus	26.7	31.17
GSMUA_Achr3P09940_001	Banana	nucleus	19.89	30.33
GSMUA_Achr4P07230_001	Banana	nucleus	25.45	30.21
GSMUA_Achr4P14270_001	Banana	nucleus	24.37	30.09
CDY36463	Canola	nucleus	21.33	29.82
VIT_11s0037g00150.t01	Wine grape	nucleus	26.34	29.46
GSMUA_Achr10P...	Banana	nucleus	24.19	29.16
KRH26105	Soybean	nucleus	23.66	28.27
GSMUA_Achr6P16760_001	Banana	nucleus	24.19	28.01
KRH54934	Soybean	nucleus	23.3	27.66
GSMUA_Achr7P00610_001	Banana	nucleus	23.48	27.18
Bra010266.1-P	Field mustard	nucleus	22.04	26.91
CDY23265	Canola	nucleus	21.68	26.48
GSMUA_Achr11P...	Banana	nucleus	21.51	25.75
GSMUA_Achr1P17160_001	Banana	nucleus	18.82	25.55
AT4G30935.1	Thale cress	nucleus	21.33	25.54
GSMUA_Achr7P25840_001	Banana	nucleus	11.11	25.1
Solyc07g005650.2.1	Tomato	nucleus	22.76	24.76
GSMUA_Achr6P32720_001	Banana	nucleus	20.07	24.56
KRH72303	Soybean	nucleus	22.04	23.08
GSMUA_Achr4P13970_001	Banana	nucleus	20.97	22.81
GSMUA_Achr4P16840_001	Banana	nucleus	17.2	22.8
CDY13396	Canola	nucleus	20.25	21.28
GSMUA_Achr6P03500_001	Banana	nucleus	19.35	20.97
GSMUA_Achr8P01790_001	Banana	nucleus	21.33	20.88
GSMUA_Achr5P23900_001	Banana	nucleus	20.61	20.35
GSMUA_Achr3P29850_001	Banana	nucleus	20.79	20.14
GSMUA_Achr5P04150_001	Banana	nucleus	21.68	19.12
GSMUA_Achr11P...	Banana	nucleus	22.04	19.01
Bra024035.1-P	Field mustard	nucleus	19.71	18.68
GSMUA_Achr4P01600_001	Banana	nucleus	22.22	18.62
CDX72277	Canola	nucleus	21.86	16.64

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr9G19580_001	EnsemblPlants:GSMUA_Achr9P19580_001	EnsemblPlants:GSMUA_Achr9T19580_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0U1R5	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF29	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000295543E	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Putative Probable WRKY transcription factor 4 [Source:GMGC_GENE;Acc:GSMUA_Achr9G19580_001]

Coordinates

chr9:+:21673895..21679383

Molecular Weight (calculated)

59645.5 Da

IEP (calculated)

6.713

GRAVY (calculated)

-0.624

Length

558 amino acids

Sequence
(BLAST)

001: MTEEKASSSD EGAGRASVDL GVPVAEEKAT SDGGDLGRTA VDLEASMSDE KASSAGEKAG REAGGTSTLP SSDAEEHLPA DRGAGPAAAA EGGAPDAAPP
101: TPNTGGRSFS QLLAGAMASP TGSPHPAPIV TVPVVAVPCF LTPAALIESQ GFAGQFAMTH QAVLATVTAQ AQMQLQAVCS SSSPKPIADS FPQPMLSTAS
201: PIPLQQMPPP TPELNKTSGD VYNWRKYGQK QVKSSENARS YYRCTDSNCS AKKKVERCPD GTIIEVIYRG KHNHDPPHKH RYTKDRGSQS GGPPLENDGL
301: EHPSIGHKES DPSSCKTEQK SSNETPKQQL YCSSDCLLDV GTKSEEDIVD EPDPKRRQVI KVFYFNFLFS PVLKTIREYI VQTEIDARHL TDGYRWRKYG
401: QKFVKGNRNP RSYYRCTHSG CPVRKHVERV PHDAKALLIT YEGEHNHEQP SSKYASETLS TTAKSNIAAG VASEQLGISG VQSVKKLSDK SHPNNVLKKV
501: VSDPELELGG DRALESAQTL LSIGCSPTSA EGTAASNSEC MKSPIFKENP AVVSVQNT

Best Arabidopsis Sequence Match ( AT4G30935.1 )
(BLAST)

001: MEEDTGIDEA KTYTVEKSEK VEPEKDGLSQ FRDEEKSLGA DMEDLHDETV RETLGKDQVQ GVRENSSVEP NVEDVLEVNE TDSVKETVVS AIVPVDEVEE
101: NRQVETSPSL AASSDSLTVT PCLSLDPATA STAQDLPLVS VPTKQEQRSD SPVVNRLSVT PVPRTPARDG YNWRKYGQKQ VKSPKGSRSY YRCTYTECCA
201: KKIECSNDSG NVVEIVNKGL HTHEPPRKTS FSPREIRVTT AIRPVSEDDT VVEELSIVPS GSDPSASTKE YICESQTLVD RKRHCENEAV EEPEPKRRLK
301: KDNSQSSDSV SKPGKKNKFV VHAAGDVGIC GDGYRWRKYG QKMVKGNPHP RNYYRCTSAG CPVRKHIETA VENTKAVIIT YKGVHNHDMP VPKKRHGPPS
401: SMLVAAAAPT SMRTRTDDQV NIPTSSQCSV GRESEKQSKE ALDVGGEKVM ESARTLLSIG FEIKQC

Arabidopsis Description

WRKY32Probable WRKY transcription factor 32 [Source:UniProtKB/Swiss-Prot;Acc:P59583]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.