Factsheet for GSMUA_Achr11P10010_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P19320_001
GSMUA_Achr5P06640_001
GSMUA_Achr6P33100_001
GSMUA_Achr9P04280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26440.1	GSMUA_Achr10P...	AT2G43790.1	24830428
AT4G26440.1	GSMUA_Achr2P19320_001	AT2G43790.1	24830428
AT4G26440.1	GSMUA_Achr5P06640_001	AT2G43790.1	24830428
AT4G26440.1	GSMUA_Achr6P33100_001	AT3G45640.1	24830428
AT4G26440.1	GSMUA_Achr9P04280_001	AT3G45640.1	24830428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P04150_001	Banana	nucleus	72.18	73.78
GSMUA_Achr4P01600_001	Banana	nucleus	66.0	64.11
GSMUA_Achr6P03500_001	Banana	nucleus	45.6	57.28
GSMUA_Achr5P23900_001	Banana	nucleus	48.38	55.4
Bra028939.1-P	Field mustard	nucleus	32.3	46.55
CDY11947	Canola	nucleus	39.88	44.95
TraesCS5D01G266300.1	Wheat	nucleus	46.21	44.1
HORVU5Hr1G072020.1	Barley	nucleus	46.06	44.08
HORVU0Hr1G004890.10	Barley	nucleus	40.96	44.02
TraesCS5A01G258100.1	Wheat	nucleus	46.06	44.02
CDY36788	Canola	nucleus	42.19	43.75
TraesCS5B01G257300.1	Wheat	nucleus	45.75	43.59
GSMUA_Achr3P09940_001	Banana	nucleus	23.96	42.35
KXG35872	Sorghum	nucleus	37.71	41.85
Zm00001d006001_P006	Maize	nucleus	36.32	40.94
Zm00001d020881_P002	Maize	nucleus	37.25	40.92
Bra002828.1-P	Field mustard	nucleus	42.5	40.86
AT5G56270.1	Thale cress	nucleus	43.28	40.76
CDY49388	Canola	nucleus	42.19	40.69
Os08t0499300-01	Rice	nucleus	42.35	40.65
Os09t0481700-01	Rice	nucleus	39.26	40.13
HORVU7Hr1G049130.1	Barley	nucleus, plastid	15.15	40.0
CDX94335	Canola	nucleus	31.53	39.69
Bra026438.1-P	Field mustard	nucleus	32.61	39.51
CDX89336	Canola	nucleus	32.61	39.51
TraesCS7D01G239800.2	Wheat	nucleus	38.02	39.17
TraesCS2A01G330500.1	Wheat	nucleus	43.89	38.64
TraesCS2B01G351600.1	Wheat	nucleus	43.43	38.49
CDY69527	Canola	nucleus	32.3	38.49
TraesCS2D01G332300.1	Wheat	nucleus	43.59	38.37
Zm00001d003331_P001	Maize	nucleus	41.58	38.26
CDY42736	Canola	nucleus	31.22	38.19
Bra019105.1-P	Field mustard	nucleus	31.22	38.19
Zm00001d025669_P001	Maize	nucleus	39.1	38.16
TraesCS7B01G136400.2	Wheat	nucleus, plastid	37.09	37.91
AT4G26440.1	Thale cress	nucleus	32.92	37.5
OQU80981	Sorghum	nucleus	39.57	37.37
TraesCS7A01G240800.1	Wheat	nucleus	37.56	37.33
CDY32799	Canola	nucleus	34.62	37.27
GSMUA_Achr11P...	Banana	nucleus	26.58	36.91
GSMUA_Achr7P25840_001	Banana	nucleus	14.06	36.84
GSMUA_Achr6P32720_001	Banana	nucleus	25.97	36.84
GSMUA_Achr4P14270_001	Banana	nucleus	25.35	36.28
KXG26525	Sorghum	nucleus	41.27	36.08
VIT_19s0015g01870.t01	Wine grape	nucleus	40.49	35.12
Zm00001d052847_P001	Maize	nucleus	39.57	35.12
GSMUA_Achr4P13970_001	Banana	nucleus	27.82	35.09
GSMUA_Achr7P00610_001	Banana	nucleus	25.5	34.23
GSMUA_Achr10P...	Banana	nucleus	24.27	33.91
GSMUA_Achr7P26450_001	Banana	nucleus	24.88	33.68
GSMUA_Achr6P16760_001	Banana	nucleus	24.73	33.2
GSMUA_Achr4P07230_001	Banana	nucleus	24.11	33.19
PGSC0003DMT400056952	Potato	nucleus	38.33	33.16
KRH62550	Soybean	nucleus	38.49	32.72
Solyc07g066220.2.1	Tomato	nucleus	36.79	32.21
KRH56379	Soybean	nucleus	37.71	31.44
GSMUA_Achr1P17160_001	Banana	nucleus	19.94	31.39
GSMUA_Achr8P01790_001	Banana	nucleus	27.51	31.23
GSMUA_Achr3P29850_001	Banana	nucleus	27.05	30.38
GSMUA_Achr4P16840_001	Banana	nucleus	19.17	29.45
GSMUA_AchrUn_...	Banana	nucleus	19.01	26.86
Os04t0471700-00	Rice	nucleus	40.96	26.55
GSMUA_Achr10P...	Banana	nucleus	18.7	25.58
GSMUA_Achr9P19580_001	Banana	nucleus	19.01	22.04

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr11G10010_001	EnsemblPlants:GSMUA_Achr11P10010_001	EnsemblPlants:GSMUA_Achr11T10010_001	InterPro:IPR003657
InterPro:IPR036576	UniProt:M0RQY1	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF86
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00029680E2	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

Putative Probable WRKY transcription factor 2 [Source:GMGC_GENE;Acc:GSMUA_Achr11G10010_001]

Coordinates

chr11:-:7833100..7843663

Molecular Weight (calculated)

69731.6 Da

IEP (calculated)

5.147

GRAVY (calculated)

-0.691

Length

647 amino acids

Sequence
(BLAST)

001: MAGTEDNSST IEYWPPPNSG SRTLSNSSND EFGSKSLSIF LAENGNVGPS WKSETQSMGP STKAEEGEAD VNDSNEFSLQ SKLFGAPISS SSGGLAERMA
101: ARKGFNVPKL DTAGIPPASM ASHSDIHSPY LTIPPGLSPT MLLESPVFLA DPMAQLSPTT GKFQFGENVA SNPILVSDSS DPTKSEDDLF EDIPEAFAFK
201: PPPESHLNLS SSETKVMLLA LLTLQQQELP SMEVSTGPEK PTQSRSIEAG MASHHSPAVD DQEDGDADLR GELSTTVGTP AEDGYNWRKY GQKQVKGSEY
301: PRSYYKCTHP NCQVKKKVER SHEGHITEIV YKSAHNHPKP HVNRRSGVPS SHPFNDPQIN ESEQPGSQTS FDGKPVKGSS QSGNGGQEWL GDGLEATSSA
401: PVAAECCDTS NALQRIQDGT RLSPDVVGVS STLSNDEEED DRATHGSVSL GCDGEGDETE SKRRKLDACA IEMSAASRAV REPRVVVQTT SEIDILDDGY
501: RWRKYGQKVV KGNPNPRSYY KCTNPGCMVR KHIERASHDL KSVITTYEGK HNHDVPAARS NSHINSAPSN TAPISAPQPH ILQQRPEPTQ DCFVRFDGHT
601: ALNAFNFPGR EQLGSTTSFP FALGQPGLTN LAMAGLGPMA AMKMSDI

Best Arabidopsis Sequence Match ( AT5G56270.1 )
(BLAST)

001: MAGFDENVAV MGEWVPRSPS PGTLFSSAIG EEKSSKRVLE RELSLNHGQV IGLEEDTSSN HNKDSSQSNV FRGGLSERIA ARAGFNAPRL NTENIRTNTD
101: FSIDSNLRSP CLTISSPGLS PATLLESPVF LSNPLAQPSP TTGKFPFLPG VNGNALSSEK AKDEFFDDIG ASFSFHPVSR SSSSFFQGTT EMMSVDYGNY
201: NNRSSSHQSA EEVKPGSENI ESSNLYGIET DNQNGQNKTS DVTTNTSLET VDHQEEEEEQ RRGDSMAGGA PAEDGYNWRK YGQKLVKGSE YPRSYYKCTN
301: PNCQVKKKVE RSREGHITEI IYKGAHNHLK PPPNRRSGMQ VDGTEQVEQQ QQQRDSAATW VSCNNTQQQG GSNENNVEEG STRFEYGNQS GSIQAQTGGQ
401: YESGDPVVVV DASSTFSNDE DEDDRGTHGS VSLGYDGGGG GGGGEGDESE SKRRKLEAFA AEMSGSTRAI REPRVVVQTT SDVDILDDGY RWRKYGQKVV
501: KGNPNPRSYY KCTAPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHGGGGDSG NGNSGGSAAV SHHYHNGHHS EPPRGRFDRQ VTTNNQSPFS
601: RPFSFQPHLG PPSGFSFGLG QTGLVNLSMP GLAYGQGKMP GLPHPYMTQP VGMSEAMMQR GMEPKVEPVS DSGQSVYNQI MSRLPQI

Arabidopsis Description

WRKY2Probable WRKY transcription factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG77]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.