Factsheet for Bra026438.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000326.1-P
Bra004784.1-P
Bra038281.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26440.1	Bra000326.1-P	AT2G43790.1	24830428
AT4G26440.1	Bra004784.1-P	AT2G43790.1	24830428
AT4G26440.1	Bra038281.1-P	AT3G45640.1	24830428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89336	Canola	nucleus	98.69	98.69
Bra019105.1-P	Field mustard	nucleus	71.35	72.02
AT4G26440.1	Thale cress	nucleus	73.41	69.01
Bra028707.1-P	Field mustard	nucleus	25.09	42.01
Bra028939.1-P	Field mustard	nucleus	34.64	41.2
GSMUA_Achr5P23900_001	Banana	nucleus	38.95	36.81
Bra002828.1-P	Field mustard	nucleus	45.13	35.81
Bra021623.1-P	Field mustard	nucleus	23.41	35.71
Bra018325.1-P	Field mustard	nucleus	24.16	34.58
GSMUA_Achr6P03500_001	Banana	nucleus	33.33	34.56
Bra017117.1-P	Field mustard	nucleus	29.4	33.91
Bra005104.1-P	Field mustard	nucleus	28.84	33.7
HORVU7Hr1G049130.1	Barley	nucleus, plastid	15.36	33.47
HORVU0Hr1G004890.10	Barley	nucleus	37.45	33.22
Bra022786.1-P	Field mustard	nucleus	23.41	33.07
Bra000064.1-P	Field mustard	nucleus	29.03	32.77
GSMUA_Achr11P...	Banana	nucleus	39.51	32.61
GSMUA_Achr5P04150_001	Banana	nucleus	37.83	31.91
Bra028971.1-P	Field mustard	nucleus	28.84	31.75
Bra026554.1-P	Field mustard	nucleus	27.9	31.37
GSMUA_Achr4P01600_001	Banana	nucleus	38.95	31.23
Bra016716.1-P	Field mustard	nucleus	26.97	30.97
Bra024780.1-P	Field mustard	nucleus	28.09	30.86
Bra026414.1-P	Field mustard	nucleus	30.9	30.84
Bra019697.1-P	Field mustard	nucleus	27.9	30.22
HORVU5Hr1G072020.1	Barley	nucleus	38.2	30.18
Os08t0499300-01	Rice	nucleus	38.02	30.12
Bra026869.1-P	Field mustard	nucleus	26.97	30.0
TraesCS5A01G258100.1	Wheat	nucleus	38.02	29.99
TraesCS5D01G266300.1	Wheat	nucleus	38.02	29.94
Bra010431.1-P	Field mustard	nucleus	30.15	29.54
TraesCS5B01G257300.1	Wheat	nucleus	37.45	29.46
Zm00001d025669_P001	Maize	nucleus	36.52	29.41
TraesCS7D01G239800.2	Wheat	nucleus	34.27	29.14
OQU80981	Sorghum	nucleus	37.08	28.91
TraesCS2A01G330500.1	Wheat	nucleus	39.7	28.84
VIT_19s0015g01870.t01	Wine grape	nucleus	40.26	28.82
TraesCS7B01G136400.2	Wheat	nucleus, plastid	34.08	28.75
TraesCS2B01G351600.1	Wheat	nucleus	38.95	28.49
TraesCS2D01G332300.1	Wheat	nucleus	39.14	28.44
Zm00001d003331_P001	Maize	nucleus	37.27	28.31
Bra023112.1-P	Field mustard	nucleus	22.1	28.1
Solyc07g066220.2.1	Tomato	nucleus	38.76	28.01
TraesCS7A01G240800.1	Wheat	nucleus	34.08	27.96
PGSC0003DMT400056952	Potato	nucleus	39.14	27.94
Bra005210.1-P	Field mustard	nucleus	21.35	27.87
Zm00001d052847_P001	Maize	nucleus	38.02	27.85
KXG26525	Sorghum	nucleus	38.2	27.57
KRH62550	Soybean	nucleus	38.95	27.33
KXG35872	Sorghum	nucleus	29.03	26.59
Zm00001d020881_P002	Maize	nucleus	29.03	26.32
KRH56379	Soybean	nucleus	38.02	26.16
Zm00001d006001_P006	Maize	nucleus	27.9	25.96
Os09t0481700-01	Rice	nucleus	29.59	24.96
Bra030848.1-P	Field mustard	nucleus	9.36	24.63
Bra013187.1-P	Field mustard	nucleus	20.22	24.16
Bra037106.1-P	Field mustard	nucleus	18.91	23.38
Bra030847.1-P	Field mustard	nucleus	17.98	21.48
Bra010266.1-P	Field mustard	nucleus	17.6	20.57
Bra019095.1-P	Field mustard	nucleus	29.03	20.56
Os04t0471700-00	Rice	nucleus	38.2	20.44
Bra038006.1-P	Field mustard	nucleus	19.29	15.75
Bra024035.1-P	Field mustard	nucleus	16.1	14.6

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra026438	EnsemblPlants:Bra026438.1	EnsemblPlants:Bra026438.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4ECC9	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF86	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000254718C	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT4G26440 (E=3e-150) WRKY34, ATWRKY34, MSP3 | WRKY34 (WRKY DNA-BINDING PROTEIN 34); transcription factor

Coordinates

chrA01:-:9303558..9305398

Molecular Weight (calculated)

58831.3 Da

IEP (calculated)

6.617

GRAVY (calculated)

-0.721

Length

534 amino acids

Sequence
(BLAST)

001: MTGFSDTFAV MGEWVDCSTN HKKRSKAELD RETSLEEDVK NKDFLQTNFQ ERSSYSGGGL SERVAARAGF KVPSINTESN LWSLNISSPG ATPATLLESP
101: VFLSNPLLSP TTGKLSSLPS DHKAKDEFFD PTIIGVESDA SQVYEQTHNI GLGGAPADDG YNWRKYGQKL VKGSEYPRSY YKCTHPNCEV KKKVERSREG
201: HITEIIYAKT HNHPKPPLNR RSGIGSSGTC NDMQIDGTEQ QGLAGTNENI EWTSPVRNYG SMQVQNRTQF GYGDAAFFKD EDEEDRTSHM SDSMGYYGEA
301: DESEPKRRKL EAYATEMSGS TRANRAPKVV VKTTSDIDIL EDGYRWRKYG QKVVKGNPNP RSYYKCTATG CIVTKHVERA SDDLTSVLTT YIGKHTHEVP
401: AARSSSSHMS SGSSGTIQGG LPTQTHNNHV HYPVPHSRSE GLVTANSSLF DFQTPMRPPW AGFSVYGGET ELLGLSISGL AIGQERFSMP ATGDPAGLML
501: QLPAEPKLEQ VSQQELGFSR NSLIYRDTSS LPQI

Best Arabidopsis Sequence Match ( AT4G26440.1 )
(BLAST)

001: MAGIDNKAAV MGEWFDCSTT NHRKRSKAEL GREFSLNYIK NEDSLQTTFQ ESSRGALRER IAARSGFNAP WLNTEDILQS KSLTISSPGL SPATLLESPV
101: FLSNPLLSPT TGKLSSVPSD KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG YNWRKYGQKL VKGSEYPRSY
201: YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
301: GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN
401: GCTVTKHVER ASDDFKSVLT TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF DFQSHLRHPT GFSVYIGQSE
501: LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV EPVSPQQGLD LSASSLICRE MLSRLRQI

Arabidopsis Description

WRKY34Probable WRKY transcription factor 34 [Source:UniProtKB/Swiss-Prot;Acc:O65590]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.