Factsheet for Bra038006.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67588	Canola	nucleus	78.29	99.22
Bra037106.1-P	Field mustard	nucleus	33.79	51.16
Bra030847.1-P	Field mustard	nucleus	34.4	50.34
AT1G55600.1	Thale cress	nucleus	32.87	44.33
Bra030848.1-P	Field mustard	nucleus	13.0	41.87
Bra026438.1-P	Field mustard	nucleus	15.75	19.29
Bra019105.1-P	Field mustard	nucleus	15.14	18.71
Bra028939.1-P	Field mustard	nucleus	12.69	18.49
Bra018325.1-P	Field mustard	nucleus	10.4	18.23
Bra021623.1-P	Field mustard	nucleus	9.63	18.0
Bra028707.1-P	Field mustard	nucleus	8.72	17.87
Bra005104.1-P	Field mustard	nucleus	12.39	17.72
Bra002828.1-P	Field mustard	nucleus	17.74	17.24
Bra017117.1-P	Field mustard	nucleus	12.08	17.06
Bra022786.1-P	Field mustard	nucleus	9.63	16.67
Bra016716.1-P	Field mustard	nucleus	11.77	16.56
Bra000064.1-P	Field mustard	nucleus	11.77	16.28
Bra024780.1-P	Field mustard	nucleus	11.77	15.84
Bra026554.1-P	Field mustard	nucleus	11.47	15.79
KRH34226	Soybean	nucleus	7.95	15.48
KRH34224	Soybean	nucleus	8.56	15.26
Bra010431.1-P	Field mustard	nucleus	12.39	14.86
Bra019697.1-P	Field mustard	nucleus	11.16	14.81
Bra026869.1-P	Field mustard	nucleus	10.86	14.79
Bra026414.1-P	Field mustard	nucleus	12.08	14.77
Bra028971.1-P	Field mustard	nucleus	10.86	14.64
Bra013187.1-P	Field mustard	nucleus	9.79	14.32
Bra023112.1-P	Field mustard	nucleus	8.56	13.33
Bra005210.1-P	Field mustard	nucleus	8.26	13.2
Bra010266.1-P	Field mustard	nucleus	6.88	9.85
Bra019095.1-P	Field mustard	nucleus	11.01	9.55
Bra024035.1-P	Field mustard	nucleus	6.73	7.47

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra038006	EnsemblPlants:Bra038006.1	EnsemblPlants:Bra038006.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4FA92	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF1	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000253EE2D	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT1G55600 (E=4e-082) WRKY10, ATWRKY10, MINI3 | WRKY10 (WRKY DNA-BINDING PROTEIN 10); transcription factor

Coordinates

chrA06:+:152241..154947

Molecular Weight (calculated)

73555.3 Da

IEP (calculated)

5.363

GRAVY (calculated)

-0.963

Length

654 amino acids

Sequence
(BLAST)

001: MSDYGDGNFM DMVSSRWAPP LSTSLSDNGL NPISDIFLQT NQSKQRPGLV DRVAARIGRN IPPIRTDNLS PCAVVFKDPK TVPFGIEISP GLSPSVMLQS
101: RSQLINPYSF PNDEPPETVE NSGDDHAKTM IFNKDVPYQP MHFDLPPQEA LIPSHVDPIG APLVASFESE VADDTDTKLM SLDDESESQD EEESNEDEDT
201: DDPSKLGRKR RIDEEEDDDI ADEHEVKPSS PKRRKYDEVS NMMTALRASN NPRVRLRMET EEAQPNDGHR WRKYGQKIVK GNPNPRSYYK CSHKGCIMKK
301: HVERAADDLR MLLVTYYGKH GHAAPLARSS SSSGPKNLYR SSVPARLGRP PFSSSSAAQD MRSFPYPSAS APRDMKRFGY PSALAPQAMR PFPSSLNPGV
401: DMTHLYKTGL SKLPSLPVNQ NHGFMDQNAE PWVNQNHGFM GQNAEPQVNQ NHGFMAQNAE PWVNQNHGFM GQNAEPRVNQ NHGFMSQNAE PQVNQNHGFM
501: GQNAEPWVNQ NHGFMGQNAE PRVNQNHGFM GENVEPQVNQ NHGFMGQNVE PQVNQNHGFM GQNDEPWLNQ NHGFMGQNDE PWLNQNHGLM DQNDEPWVNQ
601: NHGFIGQNDE PWLNQNYGFM GQNDEPKTDH VIPDGTEVYK GLRERMLANL GVKR

Best Arabidopsis Sequence Match ( AT1G55600.1 )
(BLAST)

001: MSDFDENFIE MTSYWAPPSS PSPRTILAML EQTDNGLNPI SEIFPQESLP RDHTDQSGQR SGLRERLAAR VGFNLPTLNT EENMSPLDAF FRSSNVPNSP
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM

Arabidopsis Description

WRKY10Probable WRKY transcription factor 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LG05]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.