Factsheet for Bra028707.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05016	Canola	nucleus	99.69	99.69
CDY14055	Canola	nucleus	95.92	95.92
AT5G07100.1	Thale cress	nucleus	72.1	74.43
Bra021623.1-P	Field mustard	nucleus	45.77	41.71
Bra018325.1-P	Field mustard	nucleus	46.08	39.41
Bra022786.1-P	Field mustard	nucleus	45.77	38.62
TraesCS1A01G070400.1	Wheat	nucleus	50.16	36.36
Zm00001d038023_P001	Maize	nucleus	54.86	35.79
Os05t0343400-01	Rice	nucleus	53.92	35.32
TraesCS1B01G088900.2	Wheat	nucleus	49.53	34.5
TraesCS1D01G072900.1	Wheat	nucleus	50.16	34.48
Zm00001d010399_P001	Maize	nucleus	53.6	34.34
KXG21728	Sorghum	nucleus	53.92	33.27
Bra005104.1-P	Field mustard	nucleus	47.65	33.26
Bra017117.1-P	Field mustard	nucleus	47.02	32.4
Bra000064.1-P	Field mustard	nucleus	47.34	31.92
KRH65526	Soybean	nucleus	48.28	30.37
KRH76058	Soybean	nucleus	48.28	30.37
KRH00362	Soybean	nucleus	49.84	29.39
Bra016716.1-P	Field mustard	nucleus	42.63	29.25
KRH40825	Soybean	nucleus	49.22	28.91
Bra026554.1-P	Field mustard	nucleus	42.32	28.42
Bra026869.1-P	Field mustard	nucleus	42.32	28.12
Bra019697.1-P	Field mustard	nucleus	43.26	27.99
Bra028971.1-P	Field mustard	nucleus	42.01	27.63
Bra024780.1-P	Field mustard	nucleus	41.07	26.95
Bra028939.1-P	Field mustard	nucleus	37.62	26.73
Bra026438.1-P	Field mustard	nucleus	42.01	25.09
Bra026414.1-P	Field mustard	nucleus	42.01	25.05
Bra005210.1-P	Field mustard	nucleus	31.97	24.94
Bra023112.1-P	Field mustard	nucleus	32.6	24.76
Bra010431.1-P	Field mustard	nucleus	42.01	24.59
Bra019105.1-P	Field mustard	nucleus	39.19	23.63
Bra002828.1-P	Field mustard	nucleus	47.34	22.44
Bra030848.1-P	Field mustard	nucleus	14.11	22.17
Bra013187.1-P	Field mustard	nucleus	29.47	21.03
Bra010266.1-P	Field mustard	nucleus	27.59	19.26
Bra019095.1-P	Field mustard	nucleus	41.07	17.37
Bra037106.1-P	Field mustard	nucleus	21.63	15.97
Bra024035.1-P	Field mustard	nucleus	27.9	15.11
Bra030847.1-P	Field mustard	nucleus	20.69	14.77
Bra038006.1-P	Field mustard	nucleus	17.87	8.72

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra028707	EnsemblPlants:Bra028707.1	EnsemblPlants:Bra028707.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009987	GO:GO:0034605
GO:GO:0043565	GO:GO:0070370	InterPro:IPR003657	InterPro:IPR036576	UniProt:M4EIU2	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF1	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00025431EB
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	:	:	:	:

Description

AT5G07100 (E=1e-089) WRKY26 | WRKY26; transcription factor

Coordinates

chrA02:+:2443641..2445156

Molecular Weight (calculated)

35893.9 Da

IEP (calculated)

9.531

GRAVY (calculated)

-0.860

Length

319 amino acids

Sequence
(BLAST)

001: MASFNQQRSV PKFKSATPSP LPLSSYFSMP PGLTQADLLD SPLLFTSSNV LPSPTTGTFP LESLNWKNNG LLTNRNEIKA EDGKEEHFDF AFTTIQTSPP
101: LFLSHFQTED QRSTQVDVPK FESSGNKTSE DGYNWRKDGQ KQVKGSENPR SYFRCTYPNC LTKKKVETSL VKGHVTEIVY KGSHNHPKPQ FTKRSASTAA
201: TNDVSSHQSG GEDNVDAKRG KREEAVKEPR VVVQTTSDID ILDDGYRWRK YGQKVVKGNP NPRSYYKCTF TGCCVRKQVE RAFHDAKSVI TTYEGKHNHQ
301: IPNPKKTSHL NMISDCVSF

Best Arabidopsis Sequence Match ( AT5G07100.1 )
(BLAST)

001: MGSFDRQRAV PKFKTATPSP LPLSPSPYFT MPPGLTPADF LDSPLLFTSS NILPSPTTGT FPAQSLNYNN NGLLIDKNEI KYEDTTPPLF LPSMVTQPLP
101: QLDLFKSEIM SSNKTSDDGY NWRKYGQKQV KGSENPRSYF KCTYPNCLTK KKVETSLVKG QMIEIVYKGS HNHPKPQSTK RSSSTAIAAH QNSSNGDGKD
201: IGEDETEAKR WKREENVKEP RVVVQTTSDI DILDDGYRWR KYGQKVVKGN PNPRSYYKCT FTGCFVRKHV ERAFQDPKSV ITTYEGKHKH QIPTPRRGPV
301: LRLLGKTET

Arabidopsis Description

WRKY26Probable WRKY transcription factor 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5T3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.