Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05016 | Canola | nucleus | 74.76 | 72.41 |
| Bra028707.1-P | Field mustard | nucleus | 74.43 | 72.1 |
| CDY14055 | Canola | nucleus | 73.14 | 70.85 |
| AT2G30250.1 | Thale cress | nucleus | 49.19 | 38.68 |
| TraesCS1A01G070400.1 | Wheat | nucleus | 52.1 | 36.59 |
| Os05t0343400-01 | Rice | nucleus | 55.99 | 35.52 |
| Zm00001d038023_P001 | Maize | nucleus | 55.66 | 35.17 |
| TraesCS1B01G088900.2 | Wheat | nucleus | 51.46 | 34.72 |
| TraesCS1D01G072900.1 | Wheat | nucleus | 51.78 | 34.48 |
| Zm00001d010399_P001 | Maize | nucleus | 55.34 | 34.34 |
| KXG21728 | Sorghum | nucleus | 56.31 | 33.66 |
| KRH76058 | Soybean | nucleus | 50.16 | 30.57 |
| AT2G38470.1 | Thale cress | nucleus, plastid | 51.13 | 30.44 |
| KRH65526 | Soybean | nucleus | 49.84 | 30.37 |
| KRH00362 | Soybean | nucleus | 51.46 | 29.39 |
| KRH40825 | Soybean | nucleus | 50.81 | 28.91 |
| AT2G03340.1 | Thale cress | nucleus | 45.95 | 27.68 |
| AT1G13960.1 | Thale cress | nucleus | 45.63 | 27.43 |
| AT3G01080.2 | Thale cress | nucleus | 38.84 | 26.03 |
| AT2G37260.1 | Thale cress | nucleus | 34.95 | 25.17 |
| AT4G26440.1 | Thale cress | nucleus | 45.95 | 25.0 |
| AT4G26640.2 | Thale cress | nucleus | 44.66 | 24.78 |
| AT5G56270.1 | Thale cress | nucleus | 47.9 | 21.54 |
| AT2G04880.1 | Thale cress | nucleus | 31.39 | 19.92 |
| AT4G30935.1 | Thale cress | nucleus | 27.83 | 18.45 |
| AT1G55600.1 | Thale cress | nucleus | 23.3 | 14.85 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:830601 | ProteinID:AED91109.1 | EMBL:AF224699 | EMBL:AK117545 |
| ArrayExpress:AT5G07100 | EnsemblPlantsGene:AT5G07100 | RefSeq:AT5G07100 | TAIR:AT5G07100 | RefSeq:AT5G07100-TAIR-G | EnsemblPlants:AT5G07100.1 |
| TAIR:AT5G07100.1 | EMBL:AY084692 | ProteinID:BAB11168.1 | ProteinID:CAB87266.1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0034605 |
| GO:GO:0043565 | GO:GO:0070370 | InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_196327.1 | PFAM:PF03106 |
| PO:PO:0000013 | PO:PO:0000293 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009047 | PO:PO:0020030 |
| PO:PO:0020100 | PO:PO:0025022 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF1 | UniProt:Q9C5T3 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0000138F7F | Symbol:WRKY26 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
WRKY26Probable WRKY transcription factor 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5T3]
Coordinates
chr5:+:2204248..2205811
Molecular Weight (calculated)
34912.4 Da
IEP (calculated)
10.016
GRAVY (calculated)
-0.848
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSFDRQRAV PKFKTATPSP LPLSPSPYFT MPPGLTPADF LDSPLLFTSS NILPSPTTGT FPAQSLNYNN NGLLIDKNEI KYEDTTPPLF LPSMVTQPLP
101: QLDLFKSEIM SSNKTSDDGY NWRKYGQKQV KGSENPRSYF KCTYPNCLTK KKVETSLVKG QMIEIVYKGS HNHPKPQSTK RSSSTAIAAH QNSSNGDGKD
201: IGEDETEAKR WKREENVKEP RVVVQTTSDI DILDDGYRWR KYGQKVVKGN PNPRSYYKCT FTGCFVRKHV ERAFQDPKSV ITTYEGKHKH QIPTPRRGPV
301: LRLLGKTET
101: QLDLFKSEIM SSNKTSDDGY NWRKYGQKQV KGSENPRSYF KCTYPNCLTK KKVETSLVKG QMIEIVYKGS HNHPKPQSTK RSSSTAIAAH QNSSNGDGKD
201: IGEDETEAKR WKREENVKEP RVVVQTTSDI DILDDGYRWR KYGQKVVKGN PNPRSYYKCT FTGCFVRKHV ERAFQDPKSV ITTYEGKHKH QIPTPRRGPV
301: LRLLGKTET
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.