Factsheet for AT4G26440.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026438.1-P	Field mustard	nucleus	69.01	73.41
CDY69527	Canola	nucleus	69.89	73.11
CDX89336	Canola	nucleus	68.49	72.85
CDY42736	Canola	nucleus	67.08	72.02
CDX94335	Canola	nucleus	64.96	71.79
Bra019105.1-P	Field mustard	nucleus	66.55	71.46
AT5G07100.1	Thale cress	nucleus	25.0	45.95
GSMUA_Achr5P23900_001	Banana	nucleus	38.03	38.23
AT5G56270.1	Thale cress	nucleus	44.37	36.68
GSMUA_Achr6P03500_001	Banana	nucleus	32.04	35.34
AT2G30250.1	Thale cress	nucleus	24.3	35.11
HORVU7Hr1G049130.1	Barley	nucleus, plastid	14.79	34.29
GSMUA_Achr11P...	Banana	nucleus	37.5	32.92
HORVU0Hr1G004890.10	Barley	nucleus	34.86	32.89
GSMUA_Achr5P04150_001	Banana	nucleus	36.27	32.54
AT3G01080.2	Thale cress	nucleus	26.41	32.54
GSMUA_Achr4P01600_001	Banana	nucleus	37.85	32.28
AT2G38470.1	Thale cress	nucleus, plastid	29.4	32.18
HORVU5Hr1G072020.1	Barley	nucleus	36.97	31.07
AT2G03340.1	Thale cress	nucleus	27.82	30.8
TraesCS5A01G258100.1	Wheat	nucleus	36.62	30.72
TraesCS5D01G266300.1	Wheat	nucleus	36.44	30.53
TraesCS5B01G257300.1	Wheat	nucleus	36.27	30.34
Zm00001d025669_P001	Maize	nucleus	35.21	30.17
AT1G13960.1	Thale cress	nucleus	27.11	29.96
Os08t0499300-01	Rice	nucleus	35.21	29.67
VIT_19s0015g01870.t01	Wine grape	nucleus	38.91	29.62
AT4G26640.2	Thale cress	nucleus	29.05	29.62
Zm00001d003331_P001	Maize	nucleus	36.44	29.45
OQU80981	Sorghum	nucleus	35.04	29.05
TraesCS7D01G239800.2	Wheat	nucleus	32.04	28.98
TraesCS2A01G330500.1	Wheat	nucleus	37.5	28.98
KXG26525	Sorghum	nucleus	37.32	28.65
TraesCS2B01G351600.1	Wheat	nucleus	36.8	28.63
TraesCS2D01G332300.1	Wheat	nucleus	36.97	28.57
TraesCS7B01G136400.2	Wheat	nucleus, plastid	31.69	28.44
Zm00001d052847_P001	Maize	nucleus	36.09	28.12
PGSC0003DMT400056952	Potato	nucleus	36.97	28.07
Solyc07g066220.2.1	Tomato	nucleus	36.44	28.01
KRH62550	Soybean	nucleus	37.5	27.99
AT2G37260.1	Thale cress	nucleus	21.13	27.97
TraesCS7A01G240800.1	Wheat	nucleus	31.87	27.8
KXG35872	Sorghum	nucleus	28.17	27.44
KRH56379	Soybean	nucleus	37.15	27.19
Zm00001d006001_P006	Maize	nucleus	27.29	27.0
Zm00001d020881_P002	Maize	nucleus	27.82	26.83
Os09t0481700-01	Rice	nucleus	28.52	25.59
AT1G55600.1	Thale cress	nucleus	19.54	22.89
AT2G04880.1	Thale cress	nucleus	19.54	22.79
AT4G30935.1	Thale cress	nucleus	17.08	20.82
Os04t0471700-00	Rice	nucleus	35.74	20.34

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:828750	UniProt:A4FVR3	ProteinID:AEE85199.1	ArrayExpress:AT4G26440
EnsemblPlantsGene:AT4G26440	RefSeq:AT4G26440	TAIR:AT4G26440	RefSeq:AT4G26440-TAIR-G	EnsemblPlants:AT4G26440.1	TAIR:AT4G26440.1
EMBL:AY052649	Unigene:At.26288	EMBL:BT030361	ProteinID:CAA18226.1	ProteinID:CAB79499.1	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009409	GO:GO:0009555	GO:GO:0009628	GO:GO:0009846	GO:GO:0009856	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	RefSeq:NP_194374.1	UniProt:O65590	PFAM:PF03106
PO:PO:0007616	PO:PO:0009046	PO:PO:0009066	PO:PO:0025195	PFscan:PS50811	PANTHER:PTHR31221
PANTHER:PTHR31221:SF1	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00000ACD8C	Symbol:WRKY34	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	:	:	:	:	:

Description

WRKY34Probable WRKY transcription factor 34 [Source:UniProtKB/Swiss-Prot;Acc:O65590]

Coordinates

chr4:-:13357596..13359551

Molecular Weight (calculated)

62170.1 Da

IEP (calculated)

6.041

GRAVY (calculated)

-0.656

Length

568 amino acids

Sequence
(BLAST)

001: MAGIDNKAAV MGEWFDCSTT NHRKRSKAEL GREFSLNYIK NEDSLQTTFQ ESSRGALRER IAARSGFNAP WLNTEDILQS KSLTISSPGL SPATLLESPV
101: FLSNPLLSPT TGKLSSVPSD KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG YNWRKYGQKL VKGSEYPRSY
201: YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
301: GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN
401: GCTVTKHVER ASDDFKSVLT TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF DFQSHLRHPT GFSVYIGQSE
501: LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV EPVSPQQGLD LSASSLICRE MLSRLRQI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.