Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42736 | Canola | nucleus | 89.32 | 91.68 |
| CDX94335 | Canola | nucleus | 70.72 | 74.71 |
| CDX89336 | Canola | nucleus | 72.93 | 74.16 |
| AT4G26440.1 | Thale cress | nucleus | 73.11 | 69.89 |
| CDY05016 | Canola | nucleus | 23.94 | 40.75 |
| CDY14055 | Canola | nucleus | 23.2 | 39.5 |
| CDY11947 | Canola | nucleus | 40.33 | 38.15 |
| CDY29685 | Canola | nucleus | 24.31 | 37.71 |
| CDX97834 | Canola | nucleus | 24.68 | 37.12 |
| CDY36788 | Canola | nucleus | 42.54 | 37.02 |
| GSMUA_Achr5P23900_001 | Banana | nucleus | 38.49 | 36.99 |
| CDY10720 | Canola | nucleus | 25.05 | 36.46 |
| CDX84848 | Canola | nucleus | 25.05 | 35.98 |
| CDY24017 | Canola | nucleus | 24.68 | 35.45 |
| CDX91470 | Canola | nucleus, plastid | 30.76 | 35.08 |
| CDY65564 | Canola | nucleus, plastid | 30.39 | 35.03 |
| CDY49388 | Canola | nucleus | 43.28 | 35.02 |
| GSMUA_Achr6P03500_001 | Banana | nucleus | 32.97 | 34.76 |
| CDY07729 | Canola | nucleus | 29.83 | 34.25 |
| CDY69941 | Canola | nucleus, plastid | 29.83 | 33.96 |
| CDY18383 | Canola | nucleus, plastid | 30.02 | 33.89 |
| CDY14459 | Canola | nucleus, plastid | 30.2 | 33.47 |
| CDY02051 | Canola | nucleus | 16.94 | 33.21 |
| CDY53941 | Canola | nucleus | 26.89 | 33.18 |
| CDY72350 | Canola | nucleus | 8.84 | 33.1 |
| CDX98138 | Canola | nucleus | 27.44 | 32.6 |
| CDY36419 | Canola | nucleus | 27.26 | 32.53 |
| GSMUA_Achr5P04150_001 | Banana | nucleus | 37.75 | 32.39 |
| CDY62213 | Canola | nucleus | 27.62 | 32.33 |
| GSMUA_Achr11P... | Banana | nucleus | 38.49 | 32.3 |
| HORVU7Hr1G049130.1 | Barley | nucleus, plastid | 14.55 | 32.24 |
| GSMUA_Achr4P01600_001 | Banana | nucleus | 39.41 | 32.13 |
| CDY33788 | Canola | nucleus | 26.15 | 32.13 |
| HORVU0Hr1G004890.10 | Barley | nucleus | 35.54 | 32.06 |
| CDX74281 | Canola | nucleus | 26.34 | 31.71 |
| CDY70490 | Canola | nucleus | 30.2 | 31.66 |
| CDX96873 | Canola | nucleus | 27.07 | 31.55 |
| CDY03003 | Canola | nucleus | 27.99 | 31.08 |
| CDY45169 | Canola | nucleus | 27.81 | 31.07 |
| CDY32799 | Canola | nucleus | 34.25 | 30.95 |
| CDX89317 | Canola | nucleus | 30.39 | 30.9 |
| CDX94303 | Canola | nucleus | 30.2 | 30.83 |
| CDY16122 | Canola | nucleus | 25.41 | 30.8 |
| CDY37191 | Canola | nucleus | 27.07 | 30.25 |
| CDX97359 | Canola | nucleus | 29.83 | 30.17 |
| HORVU5Hr1G072020.1 | Barley | nucleus | 37.38 | 30.03 |
| CDY14304 | Canola | nucleus | 30.02 | 29.8 |
| CDY48650 | Canola | nucleus, plastid | 24.31 | 29.8 |
| TraesCS5A01G258100.1 | Wheat | nucleus | 37.02 | 29.69 |
| TraesCS5D01G266300.1 | Wheat | nucleus | 37.02 | 29.65 |
| CDX92808 | Canola | nucleus | 28.55 | 29.58 |
| CDY46692 | Canola | nucleus | 28.36 | 29.33 |
| CDY62292 | Canola | nucleus | 11.23 | 29.33 |
| TraesCS5B01G257300.1 | Wheat | nucleus | 36.46 | 29.16 |
| CDX74976 | Canola | nucleus | 21.36 | 29.15 |
| Os08t0499300-01 | Rice | nucleus | 35.73 | 28.78 |
| CDX91348 | Canola | nucleus | 21.18 | 28.61 |
| CDX93073 | Canola | nucleus | 19.34 | 28.53 |
| Zm00001d025669_P001 | Maize | nucleus | 34.81 | 28.51 |
| OQU80981 | Sorghum | nucleus | 35.91 | 28.47 |
| Zm00001d003331_P001 | Maize | nucleus | 36.83 | 28.45 |
| TraesCS7D01G239800.2 | Wheat | nucleus | 32.78 | 28.34 |
| TraesCS2A01G330500.1 | Wheat | nucleus | 38.31 | 28.3 |
| TraesCS7B01G136400.2 | Wheat | nucleus, plastid | 32.97 | 28.28 |
| TraesCS2D01G332300.1 | Wheat | nucleus | 37.94 | 28.03 |
| TraesCS2B01G351600.1 | Wheat | nucleus | 37.57 | 27.95 |
| VIT_19s0015g01870.t01 | Wine grape | nucleus | 38.31 | 27.88 |
| Solyc07g066220.2.1 | Tomato | nucleus | 37.38 | 27.47 |
| KXG26525 | Sorghum | nucleus | 37.38 | 27.43 |
| PGSC0003DMT400056952 | Potato | nucleus | 37.57 | 27.27 |
| TraesCS7A01G240800.1 | Wheat | nucleus | 32.6 | 27.19 |
| Zm00001d052847_P001 | Maize | nucleus | 36.46 | 27.16 |
| KRH62550 | Soybean | nucleus | 37.02 | 26.41 |
| KXG35872 | Sorghum | nucleus | 27.81 | 25.9 |
| CDY62293 | Canola | nucleus | 9.58 | 25.62 |
| CDY36463 | Canola | nucleus | 18.78 | 25.56 |
| Zm00001d006001_P006 | Maize | nucleus | 26.89 | 25.44 |
| KRH56379 | Soybean | nucleus | 36.28 | 25.39 |
| Zm00001d020881_P002 | Maize | nucleus | 27.44 | 25.3 |
| Os09t0481700-01 | Rice | nucleus | 29.28 | 25.12 |
| CDY50038 | Canola | nucleus | 19.89 | 24.77 |
| CDY10548 | Canola | nucleus | 18.78 | 23.67 |
| CDY26094 | Canola | nucleus | 18.05 | 23.56 |
| CDY08253 | Canola | nucleus | 18.05 | 23.56 |
| CDX79729 | Canola | nucleus | 13.81 | 23.29 |
| CDY46769 | Canola | nucleus | 13.81 | 23.22 |
| CDY46768 | Canola | nucleus | 13.81 | 23.22 |
| CDY59057 | Canola | nucleus | 18.78 | 22.82 |
| CDY47543 | Canola | nucleus | 11.79 | 22.61 |
| CDY23265 | Canola | nucleus | 18.97 | 22.54 |
| CDY47546 | Canola | nucleus | 16.21 | 22.39 |
| Os04t0471700-00 | Rice | nucleus | 37.94 | 20.64 |
| CDY67588 | Canola | nucleus | 18.78 | 19.77 |
| CDY54360 | Canola | nucleus | 19.34 | 18.88 |
| CDY13396 | Canola | nucleus | 17.68 | 18.08 |
| CDY52777 | Canola | nucleus, plastid | 4.6 | 14.62 |
| CDX72277 | Canola | nucleus | 18.97 | 14.05 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078JVH0 | UniProt:A0A078JVH0 | EnsemblPlants:CDY69527 | ProteinID:CDY69527 |
| ProteinID:CDY69527.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00088494001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF86 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EED623 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng64000DBnaCnng64000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVH0]
Coordinates
chrLK039620:+:1581..3459
Molecular Weight (calculated)
59230.1 Da
IEP (calculated)
6.617
GRAVY (calculated)
-0.624
Length
543 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGFDNNFAV MGEWLDPSPN HKKRSKAELE REVSLEDIKN KGFLHASFQE KPCYSSNGLS ERIAARTGFK VPRLKTESIF PSTCLAISSP GVSPATLLES
101: PVFLSNPLTS PTTGKLSSLP SDKAKYEFIE DISLTLSLDP TTNIGSEHDD SQAYGSGLGD LMPSGAPGDD GYNWRKYGQK LVKGSEYPRS YYKCTHPNCE
201: VKKKVERSRE GHITEIIYVK AHNHLKPPTN RRSVTGLSGT GDDMQIDGTG TNENLQWTSP VYEEVGYGSH SGSMQVQSGT QFGYGGVATD AFSKDEEDRT
301: SFMSVSLGYD GQVDESEPKR RKLETSGSSR GTREPKVVVK TTSDIDILED GYRWRKYGQK VVKGNPNPRS YYKCTASGCN VTKHVERASD DLTSVLTTYI
401: GKHNHAVPAA RNSSHVGSGS SGTVQGGLAT QTHNQHVHYP VPRSSSEGMV TANSSLHDFQ PYLRSPSGFS VYYVGEAELT DISVSGLPIG QERFLGLEAL
501: ATGDPDGLML QLAAEPKVEQ MSQQELGLSR SSLIDIMSRL PQI
101: PVFLSNPLTS PTTGKLSSLP SDKAKYEFIE DISLTLSLDP TTNIGSEHDD SQAYGSGLGD LMPSGAPGDD GYNWRKYGQK LVKGSEYPRS YYKCTHPNCE
201: VKKKVERSRE GHITEIIYVK AHNHLKPPTN RRSVTGLSGT GDDMQIDGTG TNENLQWTSP VYEEVGYGSH SGSMQVQSGT QFGYGGVATD AFSKDEEDRT
301: SFMSVSLGYD GQVDESEPKR RKLETSGSSR GTREPKVVVK TTSDIDILED GYRWRKYGQK VVKGNPNPRS YYKCTASGCN VTKHVERASD DLTSVLTTYI
401: GKHNHAVPAA RNSSHVGSGS SGTVQGGLAT QTHNQHVHYP VPRSSSEGMV TANSSLHDFQ PYLRSPSGFS VYYVGEAELT DISVSGLPIG QERFLGLEAL
501: ATGDPDGLML QLAAEPKVEQ MSQQELGLSR SSLIDIMSRL PQI
001: MAGIDNKAAV MGEWFDCSTT NHRKRSKAEL GREFSLNYIK NEDSLQTTFQ ESSRGALRER IAARSGFNAP WLNTEDILQS KSLTISSPGL SPATLLESPV
101: FLSNPLLSPT TGKLSSVPSD KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG YNWRKYGQKL VKGSEYPRSY
201: YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
301: GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN
401: GCTVTKHVER ASDDFKSVLT TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF DFQSHLRHPT GFSVYIGQSE
501: LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV EPVSPQQGLD LSASSLICRE MLSRLRQI
101: FLSNPLLSPT TGKLSSVPSD KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG YNWRKYGQKL VKGSEYPRSY
201: YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
301: GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN
401: GCTVTKHVER ASDDFKSVLT TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF DFQSHLRHPT GFSVYIGQSE
501: LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV EPVSPQQGLD LSASSLICRE MLSRLRQI
Arabidopsis Description
WRKY34Probable WRKY transcription factor 34 [Source:UniProtKB/Swiss-Prot;Acc:O65590]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.