Factsheet for TraesCS7A01G240800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G106400.1
TraesCS4B01G197800.1
TraesCS4D01G198600.1
TraesCS7A01G111300.1
TraesCS7B01G009200.1
TraesCS7D01G106400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26440.1	TraesCS7A01G111300.1	AT2G43790.1	24830428
AT4G26440.1	TraesCS7B01G009200.1	AT2G43790.1	24830428
AT4G26440.1	TraesCS7D01G106400.1	AT2G43790.1	24830428
AT4G26440.1	TraesCS4A01G106400.1	AT3G45640.1	24830428
AT4G26440.1	TraesCS4B01G197800.1	AT3G45640.1	24830428
AT4G26440.1	TraesCS4D01G198600.1	AT3G45640.1	24830428

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G239800.2	Wheat	nucleus	90.48	93.79
TraesCS7B01G136400.2	Wheat	nucleus, plastid	87.71	90.21
HORVU7Hr1G049130.1	Barley	nucleus, plastid	30.57	81.22
Os08t0499300-01	Rice	nucleus	55.76	53.86
OQU80981	Sorghum	nucleus	53.61	50.95
TraesCS5A01G258100.1	Wheat	nucleus	48.85	46.97
Zm00001d052847_P001	Maize	nucleus	51.0	45.54
GSMUA_Achr5P23900_001	Banana	nucleus	34.26	39.47
GSMUA_Achr6P03500_001	Banana	nucleus	30.57	38.64
Bra028939.1-P	Field mustard	nucleus	26.11	37.86
GSMUA_Achr11P...	Banana	nucleus	37.33	37.56
GSMUA_Achr5P04150_001	Banana	nucleus	36.41	37.44
GSMUA_Achr4P01600_001	Banana	nucleus	37.94	37.09
CDY11947	Canola	nucleus	32.57	36.93
CDY36788	Canola	nucleus	34.26	35.74
TraesCS1A01G070400.1	Wheat	nucleus	23.96	35.45
Bra002828.1-P	Field mustard	nucleus	35.79	34.62
CDY49388	Canola	nucleus	35.64	34.58
CDX94335	Canola	nucleus	27.19	34.44
CDX89336	Canola	nucleus	28.11	34.27
Bra026438.1-P	Field mustard	nucleus	27.96	34.08
AT5G56270.1	Thale cress	nucleus	35.79	33.92
TraesCS2A01G330500.1	Wheat	nucleus	37.17	32.93
CDY69527	Canola	nucleus	27.19	32.6
CDY32799	Canola	nucleus	29.49	31.95
AT4G26440.1	Thale cress	nucleus	27.8	31.87
Bra019105.1-P	Field mustard	nucleus	25.81	31.76
CDY42736	Canola	nucleus	25.81	31.76
TraesCS5A01G104900.1	Wheat	nucleus	23.2	30.38
TraesCS3A01G347500.1	Wheat	nucleus	25.81	29.89
TraesCS5A01G396800.1	Wheat	nucleus	19.35	29.72
TraesCS4A01G162500.1	Wheat	nucleus	21.97	29.3
TraesCS1A01G298600.1	Wheat	nucleus, plastid	22.12	28.51
VIT_19s0015g01870.t01	Wine grape	nucleus	31.34	27.35
TraesCS2A01G189700.1	Wheat	nucleus	25.04	26.63
KRH62550	Soybean	nucleus	31.03	26.54
KRH56379	Soybean	nucleus	31.03	26.03
TraesCS2A01G182700.1	Wheat	nucleus	18.59	26.02
PGSC0003DMT400029328	Potato	nucleus	24.73	23.1
TraesCS7A01G294800.2	Wheat	nucleus	17.97	22.41
Solyc10g005680.1.1	Tomato	nucleus	23.35	21.62

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF86	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS7A01G240800	EnsemblPlants:TraesCS7A01G240800.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7A:-:216350138..216352870

Molecular Weight (calculated)

70963.7 Da

IEP (calculated)

8.188

GRAVY (calculated)

-0.725

Length

651 amino acids

Sequence
(BLAST)

001: MAGASNRRGA VMEDWMLSTP SPRTLMLSLF NNDFSSGPFS DVSSDSGSNK PHDGMERSKA SVGSSPGESS QVTKTSLHFE PNLFDANEKS SPDSGSPAER
101: NGFCALKIDT SRVGFSASIR SPIIIPPGVS PRELLESPVF LPNAIAQPSP TTGKLPFLMR TNANTTIPSV HKKAQELSHD DHTISFQQIL RSKPTFSFVD
201: KGPSVTHHNQ PLASENNHRI PDNEQEDSKA NRNGDDSPAT IIVRAEDGYN WRKYGKKQVK NSEHPTSYYK CSHQNCPVKK KVERCQDGDI TEIVYKGSHN
301: HPLPPPDRRP SVPFSHSNDL QADGEENALD DHFQHAHGEV PATNLSASLN REGFADRSAI REAIDVSPPT LSGEDNNREA HGTVSSGIDR DQDVTESKRR
401: MMDYVTPATA IGTIDIGALA SRAVREARVI VQTTSEVDVL DDGYRWRKYG QKVVKGNPNP RSYYKCTHPS CPVRKHVERA PNDLKSVITT YEGKHTHEVP
501: ADRNNGYPSS GHGHVAPLPQ ANGLHWRSGP AQGGIIPQYS GAAAYGSLAQ LGVAGGFPFG MLPRGLALVP VPAQMMAGHP SAMQGTPRLV LQAREVKGNP
601: AARPADQSGT GPAAYQQLMS SFTSWLQRTR LTEKGNTENS NDFKQEKWIK I

Best Arabidopsis Sequence Match ( AT2G38470.1 )
(BLAST)

001: MAASFLTMDN SRTRQNMNGS ANWSQQSGRT STSSLEDLEI PKFRSFAPSS ISISPSLVSP STCFSPSLFL DSPAFVSSSA NVLASPTTGA LITNVTNQKG
101: INEGDKSNNN NFNLFDFSFH TQSSGVSAPT TTTTTTTTTT TTNSSIFQSQ EQQKKNQSEQ WSQTETRPNN QAVSYNGREQ RKGEDGYNWR KYGQKQVKGS
201: ENPRSYYKCT FPNCPTKKKV ERSLEGQITE IVYKGSHNHP KPQSTRRSSS SSSTFHSAVY NASLDHNRQA SSDQPNSNNS FHQSDSFGMQ QEDNTTSDSV
301: GDDEFEQGSS IVSRDEEDCG SEPEAKRWKG DNETNGGNGG GSKTVREPRI VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTI GCPVRKHVER
401: ASHDMRAVIT TYEGKHNHDV PAARGSGYAT NRAPQDSSSV PIRPAAIAGH SNYTTSSQAP YTLQMLHNNN TNTGPFGYAM NNNNNNSNLQ TQQNFVGGGF
501: SRAKEEPNEE TSFFDSFMP

Arabidopsis Description

WRKY33WRKY33 [Source:UniProtKB/TrEMBL;Acc:A0A178VLS4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.