Factsheet for Bra028939.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36788	Canola	nucleus	98.0	70.51
CDY11947	Canola	nucleus	83.74	65.51
Bra002828.1-P	Field mustard	nucleus	85.97	57.36
AT5G56270.1	Thale cress	nucleus	85.3	55.75
GSMUA_Achr6P03500_001	Banana	nucleus	47.88	41.75
HORVU7Hr1G049130.1	Barley	nucleus, plastid	21.38	39.18
Bra028707.1-P	Field mustard	nucleus	26.73	37.62
GSMUA_Achr5P23900_001	Banana	nucleus	46.55	36.99
Bra026438.1-P	Field mustard	nucleus	41.2	34.64
GSMUA_Achr5P04150_001	Banana	nucleus	48.11	34.12
GSMUA_Achr4P01600_001	Banana	nucleus	49.22	33.18
GSMUA_Achr11P...	Banana	nucleus	46.55	32.3
Bra019105.1-P	Field mustard	nucleus	37.86	32.14
HORVU5Hr1G072020.1	Barley	nucleus	48.33	32.1
Bra021623.1-P	Field mustard	nucleus	24.94	32.0
Bra005104.1-P	Field mustard	nucleus	32.52	31.95
TraesCS5A01G258100.1	Wheat	nucleus	47.44	31.46
TraesCS5D01G266300.1	Wheat	nucleus	47.44	31.42
TraesCS5B01G257300.1	Wheat	nucleus	47.44	31.37
Bra017117.1-P	Field mustard	nucleus	32.29	31.32
Bra000064.1-P	Field mustard	nucleus	32.52	30.87
HORVU0Hr1G004890.10	Barley	nucleus	40.09	29.9
Bra018325.1-P	Field mustard	nucleus	24.72	29.76
Os08t0499300-01	Rice	nucleus	44.32	29.53
Bra028971.1-P	Field mustard	nucleus	31.85	29.48
Bra022786.1-P	Field mustard	nucleus	24.28	28.84
VIT_19s0015g01870.t01	Wine grape	nucleus	47.44	28.55
Bra016716.1-P	Field mustard	nucleus	29.4	28.39
TraesCS2A01G330500.1	Wheat	nucleus	46.33	28.3
Zm00001d025669_P001	Maize	nucleus	41.65	28.21
Zm00001d003331_P001	Maize	nucleus	44.1	28.16
Bra026554.1-P	Field mustard	nucleus	29.62	28.0
TraesCS2B01G351600.1	Wheat	nucleus	45.21	27.81
TraesCS2D01G332300.1	Wheat	nucleus	45.43	27.76
Bra019697.1-P	Field mustard	nucleus	30.29	27.59
TraesCS7D01G239800.2	Wheat	nucleus	38.31	27.39
KXG26525	Sorghum	nucleus	44.77	27.16
TraesCS7B01G136400.2	Wheat	nucleus, plastid	38.08	27.01
Bra024780.1-P	Field mustard	nucleus	29.18	26.95
Bra026414.1-P	Field mustard	nucleus	32.07	26.92
Bra026869.1-P	Field mustard	nucleus	28.73	26.88
PGSC0003DMT400056952	Potato	nucleus	44.77	26.87
KXG35872	Sorghum	nucleus	34.74	26.76
KRH62550	Soybean	nucleus	45.21	26.68
Solyc07g066220.2.1	Tomato	nucleus	43.88	26.66
OQU80981	Sorghum	nucleus	40.53	26.57
Bra010431.1-P	Field mustard	nucleus	32.07	26.42
Zm00001d020881_P002	Maize	nucleus	34.52	26.32
TraesCS7A01G240800.1	Wheat	nucleus	37.86	26.11
Zm00001d052847_P001	Maize	nucleus	42.32	26.06
Os09t0481700-01	Rice	nucleus	36.3	25.75
KRH56379	Soybean	nucleus	44.1	25.52
Zm00001d006001_P006	Maize	nucleus	32.29	25.26
Bra023112.1-P	Field mustard	nucleus	23.61	25.24
Bra005210.1-P	Field mustard	nucleus	22.49	24.69
Bra030848.1-P	Field mustard	nucleus	10.69	23.65
Bra013187.1-P	Field mustard	nucleus	23.39	23.49
Os04t0471700-00	Rice	nucleus	44.32	19.94
Bra010266.1-P	Field mustard	nucleus	19.38	19.04
Bra019095.1-P	Field mustard	nucleus	30.96	18.43
Bra037106.1-P	Field mustard	nucleus	17.37	18.06
Bra030847.1-P	Field mustard	nucleus	17.59	17.67
Bra024035.1-P	Field mustard	nucleus	18.71	14.26
Bra038006.1-P	Field mustard	nucleus	18.49	12.69

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra028939	EnsemblPlants:Bra028939.1	EnsemblPlants:Bra028939.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4EJH3	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF1	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000253FD9C	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT5G56270 (E=2e-112) WRKY2, ATWRKY2 | WRKY2; transcription factor

Coordinates

chrA03:-:5507682..5509190

Molecular Weight (calculated)

49041.0 Da

IEP (calculated)

6.456

GRAVY (calculated)

-1.125

Length

449 amino acids

Sequence
(BLAST)

001: MTPVDNSNYN NSSSHQKLGY EQSGLKRKTS DATTNTNDHQ EVEEGEGEEQ RGVDSMVGGG APAEDGYNWR KYGQKLVKGS EYPRSYYKCT NPNCQVKKKV
101: ERSREGHITE IIYKGAHNHS KPPPNRRSGM QLDGTEQAEQ QQQQQQRDNT QQQVGSNENN VEEGNQSAQT GGQYESGDVI VVDASSTFSN DEDEDDRGTH
201: GSASLGYDGG GGDGEGGEDE SESKRRKLEA YAIEMSGATR AIREPRVVVQ TTSGVDILDD GYRWRKYGQK VVKGNPNPRS YYKCTAPGCT VRKHVERASH
301: DLKSVITTYE GKHDHEVPAA RNSSHGGGGG NGNSGVSAAQ TNHYSEPPRG RYDRQLNQSQ FGRPFSFQPH LGPPSGFAFG LGQTGLGNFS IPGLAFGQGK
401: LPSLPYQYLS QPGGMSEAMM QRGMEPKVEP GSETGQSVYN QIMSRLPQI

Best Arabidopsis Sequence Match ( AT5G56270.1 )
(BLAST)

001: MAGFDENVAV MGEWVPRSPS PGTLFSSAIG EEKSSKRVLE RELSLNHGQV IGLEEDTSSN HNKDSSQSNV FRGGLSERIA ARAGFNAPRL NTENIRTNTD
101: FSIDSNLRSP CLTISSPGLS PATLLESPVF LSNPLAQPSP TTGKFPFLPG VNGNALSSEK AKDEFFDDIG ASFSFHPVSR SSSSFFQGTT EMMSVDYGNY
201: NNRSSSHQSA EEVKPGSENI ESSNLYGIET DNQNGQNKTS DVTTNTSLET VDHQEEEEEQ RRGDSMAGGA PAEDGYNWRK YGQKLVKGSE YPRSYYKCTN
301: PNCQVKKKVE RSREGHITEI IYKGAHNHLK PPPNRRSGMQ VDGTEQVEQQ QQQRDSAATW VSCNNTQQQG GSNENNVEEG STRFEYGNQS GSIQAQTGGQ
401: YESGDPVVVV DASSTFSNDE DEDDRGTHGS VSLGYDGGGG GGGGEGDESE SKRRKLEAFA AEMSGSTRAI REPRVVVQTT SDVDILDDGY RWRKYGQKVV
501: KGNPNPRSYY KCTAPGCTVR KHVERASHDL KSVITTYEGK HNHDVPAARN SSHGGGGDSG NGNSGGSAAV SHHYHNGHHS EPPRGRFDRQ VTTNNQSPFS
601: RPFSFQPHLG PPSGFSFGLG QTGLVNLSMP GLAYGQGKMP GLPHPYMTQP VGMSEAMMQR GMEPKVEPVS DSGQSVYNQI MSRLPQI

Arabidopsis Description

WRKY2Probable WRKY transcription factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FG77]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.