Factsheet for Bra019697.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98138	Canola	nucleus	89.66	96.72
CDY36419	Canola	nucleus	88.24	95.6
Bra026869.1-P	Field mustard	nucleus	85.4	87.71
Bra016716.1-P	Field mustard	nucleus	80.53	85.38
AT1G13960.1	Thale cress	nucleus	84.58	81.13
Bra026554.1-P	Field mustard	nucleus	67.75	70.32
Bra024780.1-P	Field mustard	nucleus	64.71	65.64
KRH70820	Soybean	nucleus, plastid	43.2	58.52
KRH74950	Soybean	nucleus	51.93	56.26
VIT_01s0011g00220.t01	Wine grape	nucleus	56.39	55.38
Solyc05g012770.2.1	Tomato	nucleus	55.38	53.74
PGSC0003DMT400072836	Potato	nucleus	54.56	52.95
KRG89512	Soybean	nucleus	46.86	52.62
KRH50544	Soybean	nucleus	45.84	51.13
Bra028707.1-P	Field mustard	nucleus	27.99	43.26
Bra021623.1-P	Field mustard	nucleus	27.99	39.43
Bra018325.1-P	Field mustard	nucleus	29.41	38.87
Bra022786.1-P	Field mustard	nucleus	27.18	35.45
Bra005104.1-P	Field mustard	nucleus	32.86	35.45
Bra000064.1-P	Field mustard	nucleus	33.27	34.67
Bra017117.1-P	Field mustard	nucleus	32.25	34.34
Bra005210.1-P	Field mustard	nucleus	25.36	30.56
Bra028971.1-P	Field mustard	nucleus	29.82	30.31
Bra028939.1-P	Field mustard	nucleus	27.59	30.29
Bra023112.1-P	Field mustard	nucleus	25.76	30.24
Bra026414.1-P	Field mustard	nucleus	32.05	29.53
Bra010431.1-P	Field mustard	nucleus	32.25	29.17
Bra019105.1-P	Field mustard	nucleus	30.02	27.98
Bra026438.1-P	Field mustard	nucleus	30.22	27.9
Bra030848.1-P	Field mustard	nucleus	10.95	26.6
Bra002828.1-P	Field mustard	nucleus	35.29	25.85
Bra013187.1-P	Field mustard	nucleus	20.89	23.04
Bra010266.1-P	Field mustard	nucleus	20.89	22.54
Bra030847.1-P	Field mustard	nucleus	18.66	20.58
Bra019095.1-P	Field mustard	nucleus	31.24	20.42
Bra037106.1-P	Field mustard	nucleus	17.65	20.14
Bra024035.1-P	Field mustard	nucleus	21.3	17.83
Bra038006.1-P	Field mustard	nucleus	14.81	11.16

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra019697	EnsemblPlants:Bra019697.1	EnsemblPlants:Bra019697.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4DT54	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF84	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000253EDFC	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT2G03340 (E=4e-106) WRKY3 | WRKY3; transcription factor

Coordinates

chrA06:+:4910424..4912582

Molecular Weight (calculated)

53392.8 Da

IEP (calculated)

8.002

GRAVY (calculated)

-0.843

Length

493 amino acids

Sequence
(BLAST)

001: MSEEKEELPS TSNKSTGAPS RPTLSLPPRP FSEMFFSGGV GFSPGPMTLV SNMFPDSDEF RSFSQLLSGV MPSPAAAASS SSLAASEEGD NNSSSGGDVD
101: PRFKQSRPTG LMISQSPSTM FAVTPGLSPA MRLDSPSFLG LFSPLQGSYG MTHQQALAQV TAQAVQANAN MQPQTEYPPS SQASSVQPQN PTTAPDSSAP
201: RETSDTTIIE HRSQQPLNVD KPADDGYNWR KYGQKQVKGS EFPRSYYKCT NPGCPVKKKV ERSLDGQVTE IIYKGQHNHE PPQNTRRGNR DSNANLNGSS
301: VNNKTTREQH EAAASQATTE QMSEASDGEE VGNGETGVRK KAEDEPDAKR RSAEVRVSEP AAPPAVAAAA SHRTVTEPRI IVQTTSEVDL LDDGYRWRKY
401: GQKVVKGNPY PRSYYKCTTQ GCGVRKHVER AATDPKAVVT TYEGKHNHDL PASKSSSHAA AAAAQLRPEN RLANLNQQQQ PVARLRLKEE QII

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.