Factsheet for Bra030847.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY59057	Canola	nucleus	99.55	99.55
Bra037106.1-P	Field mustard	nucleus	51.68	53.47
AT1G55600.1	Thale cress	nucleus	54.59	50.31
Bra030848.1-P	Field mustard	nucleus	21.7	47.78
Bra038006.1-P	Field mustard	nucleus	50.34	34.4
Bra028707.1-P	Field mustard	nucleus	14.77	20.69
Bra018325.1-P	Field mustard	nucleus	17.0	20.38
Bra021623.1-P	Field mustard	nucleus	15.66	20.0
Bra016716.1-P	Field mustard	nucleus	20.58	19.78
Bra026554.1-P	Field mustard	nucleus	20.58	19.37
Bra024780.1-P	Field mustard	nucleus	20.58	18.93
Bra019105.1-P	Field mustard	nucleus	22.37	18.9
Bra019697.1-P	Field mustard	nucleus	20.58	18.66
Bra022786.1-P	Field mustard	nucleus	15.44	18.25
Bra005104.1-P	Field mustard	nucleus	18.57	18.16
Bra026438.1-P	Field mustard	nucleus	21.48	17.98
Bra026869.1-P	Field mustard	nucleus	19.24	17.92
Bra028939.1-P	Field mustard	nucleus	17.67	17.59
Bra002828.1-P	Field mustard	nucleus	25.95	17.24
Bra000064.1-P	Field mustard	nucleus	18.12	17.12
Bra017117.1-P	Field mustard	nucleus	17.67	17.06
Bra028971.1-P	Field mustard	nucleus	18.12	16.7
Bra010431.1-P	Field mustard	nucleus	19.46	15.96
KRH34226	Soybean	nucleus	11.86	15.77
Bra023112.1-P	Field mustard	nucleus	14.54	15.48
KRH34224	Soybean	nucleus	12.53	15.26
Bra026414.1-P	Field mustard	nucleus	17.9	14.95
Bra005210.1-P	Field mustard	nucleus	13.65	14.91
Bra013187.1-P	Field mustard	nucleus	13.65	13.65
Bra010266.1-P	Field mustard	nucleus	10.96	10.72
Bra019095.1-P	Field mustard	nucleus	17.45	10.34
Bra024035.1-P	Field mustard	nucleus	10.96	8.32

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra030847	EnsemblPlants:Bra030847.1	EnsemblPlants:Bra030847.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4EPX6	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF1	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000254705E	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT1G55600 (E=2e-049) WRKY10, ATWRKY10, MINI3 | WRKY10 (WRKY DNA-BINDING PROTEIN 10); transcription factor

Coordinates

chrA08:+:239211..241785

Molecular Weight (calculated)

50578.5 Da

IEP (calculated)

4.872

GRAVY (calculated)

-0.819

Length

447 amino acids

Sequence
(BLAST)

001: MSDWSGNSIE IWNPPKMSDC DGIVRAMLEQ TDNGLNSISQ IFPKTNLSTN HQSEQRSSLG ERVSSRIRFN VPPLETENIM SPFAVSRSQT NVPSPLIAVS
101: PGFSPSALLQ SPKKFSNSFS QHIIQSRVAN DGPPEMVESS GGDYATTTIF NNDVPHQPMN FDHMPHHEGF YDIPTEQSIY VPSHESHADL IGAPLVTSFE
201: SDEVANETDI MNIISLDSED EDEDYKEDEE YKEDENVDEE DDSVDELPPR KRRKYEVSDM FGAKRTRKDE RVILRMECEE DNPDDGYQWR KYGRKIVNGN
301: SNPRSYYKCT YGGCNVKKHV ERGADDVKLL VVTYDGKHNH PIPTGRSSNR SGPRNRSGFS VSQTPRLGRL PSSSSACQYC YSSLEPHPDM ALLYMTGLSK
401: LQSFPVNHNH GFMYRHDEPI IDRVIPDGTE VYNGMKDRLL PNFGFNF

Best Arabidopsis Sequence Match ( AT1G55600.1 )
(BLAST)

001: MSDFDENFIE MTSYWAPPSS PSPRTILAML EQTDNGLNPI SEIFPQESLP RDHTDQSGQR SGLRERLAAR VGFNLPTLNT EENMSPLDAF FRSSNVPNSP
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM

Arabidopsis Description

WRKY10Probable WRKY transcription factor 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LG05]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.