Factsheet for Bra021623.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000326.1-P
Bra000955.1-P
Bra001716.1-P
Bra004784.1-P
Bra022345.1-P
Bra037569.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G30250.1	Bra000326.1-P	AT2G43790.1	15990873
AT2G30250.1	Bra004784.1-P	AT2G43790.1	15990873
AT2G30250.1	Bra001716.1-P	AT3G18690.1	15990873
AT2G30250.1	Bra022345.1-P	AT3G18690.1	15990873
AT2G30250.1	Bra037569.1-P	AT3G18690.1	15990873
AT2G30250.1	Bra000955.1-P	AT4G01370.1	15990873

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29685	Canola	nucleus	99.43	99.43
CDX97834	Canola	nucleus	96.57	93.63
Bra018325.1-P	Field mustard	nucleus	90.0	84.45
Bra022786.1-P	Field mustard	nucleus	86.29	79.89
AT2G30250.1	Thale cress	nucleus	84.0	74.81
Bra028707.1-P	Field mustard	nucleus	41.71	45.77
TraesCS1A01G070400.1	Wheat	nucleus	46.57	37.05
TraesCS1B01G088900.2	Wheat	nucleus	46.0	35.15
TraesCS1D01G072900.1	Wheat	nucleus	46.57	35.13
Bra005104.1-P	Field mustard	nucleus	44.86	34.35
Zm00001d010399_P001	Maize	nucleus	48.29	33.94
Os05t0343400-01	Rice	nucleus	47.14	33.88
Bra017117.1-P	Field mustard	nucleus	44.57	33.69
Zm00001d038023_P001	Maize	nucleus	46.86	33.54
Bra000064.1-P	Field mustard	nucleus	44.86	33.19
KXG21728	Sorghum	nucleus	48.0	32.5
KRH00362	Soybean	nucleus	46.0	29.76
Bra016716.1-P	Field mustard	nucleus	38.86	29.25
KRH40825	Soybean	nucleus	45.14	29.1
KRH76058	Soybean	nucleus	42.0	28.99
KRH65526	Soybean	nucleus	41.71	28.8
Bra026869.1-P	Field mustard	nucleus	39.14	28.54
Bra026554.1-P	Field mustard	nucleus	38.0	28.0
Bra019697.1-P	Field mustard	nucleus	39.43	27.99
Bra024780.1-P	Field mustard	nucleus	38.0	27.37
Bra005210.1-P	Field mustard	nucleus	30.57	26.16
Bra023112.1-P	Field mustard	nucleus	31.14	25.95
Bra028971.1-P	Field mustard	nucleus	35.43	25.57
Bra028939.1-P	Field mustard	nucleus	32.0	24.94
Bra019105.1-P	Field mustard	nucleus	37.43	24.76
Bra026414.1-P	Field mustard	nucleus	37.14	24.3
Bra010431.1-P	Field mustard	nucleus	37.14	23.85
Bra026438.1-P	Field mustard	nucleus	35.71	23.41
Bra030848.1-P	Field mustard	nucleus	13.43	23.15
Bra002828.1-P	Field mustard	nucleus	40.86	21.25
Bra013187.1-P	Field mustard	nucleus	26.29	20.58
Bra010266.1-P	Field mustard	nucleus	24.0	18.38
Bra037106.1-P	Field mustard	nucleus	21.71	17.59
Bra019095.1-P	Field mustard	nucleus	36.0	16.71
Bra030847.1-P	Field mustard	nucleus	20.0	15.66
Bra024035.1-P	Field mustard	nucleus	23.71	14.09
Bra038006.1-P	Field mustard	nucleus	18.0	9.63

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra021623	EnsemblPlants:Bra021623.1	EnsemblPlants:Bra021623.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:M4DYM7	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF1	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI00025445EF	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

AT2G30250 (E=9e-141) WRKY25, ATWRKY25 | WRKY25; transcription factor

Coordinates

chrA04:-:13498874..13500248

Molecular Weight (calculated)

39276.6 Da

IEP (calculated)

7.492

GRAVY (calculated)

-0.870

Length

350 amino acids

Sequence
(BLAST)

001: MSSTSFTDLL ASSGVDPYEQ DEDFLGGFYP EETGSGLPKF KTAQPPPLPI SQSSRSFAFS ELLDSPLLRS SSHSLISPTT GAFPFQGFNG SDFPWQLPSQ
101: TQTQPQNAAS ALQETYGVQD LQKKLEDPVP REGKVPSYMV SRNSNDGYGW RKYGQKQVKK SENPRSYFKC TYPNCVSKKI VETASDGQIT EIIYKGGHNH
201: PKPEFTKRPS SSARRMFNPS SVVSEQSESS SISFDYGEVD EEKEQLDIKR LKREGEDEGM SVEVSRGVKE PRVVVQTISE IDVLIDGFRW RKYGQKVVKG
301: NTNPRSYYKC TYQGCGVRKQ VERSAEDERA VLTTYEGRHN HDVPTAPRRS

Best Arabidopsis Sequence Match ( AT2G30250.1 )
(BLAST)

001: MSSTSFTDLL GSSGVDCYED DEDLRVSGSS FGGYYPERTG SGLPKFKTAQ PPPLPISQSS HNFTFSDYLD SPLLLSSSHS LISPTTGTFP LQGFNGTTNN
101: HSDFPWQLQS QPSNASSALQ ETYGVQDHEK KQEMIPNEIA TQNNNQSFGT ERQIKIPAYM VSRNSNDGYG WRKYGQKQVK KSENPRSYFK CTYPDCVSKK
201: IVETASDGQI TEIIYKGGHN HPKPEFTKRP SQSSLPSSVN GRRLFNPASV VSEPHDQSEN SSISFDYSDL EQKSFKSEYG EIDEEEEQPE MKRMKREGED
301: EGMSIEVSKG VKEPRVVVQT ISDIDVLIDG FRWRKYGQKV VKGNTNPRSY YKCTFQGCGV KKQVERSAAD ERAVLTTYEG RHNHDIPTAL RRS

Arabidopsis Description

WRKY25Probable WRKY transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:O22921]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.