Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24017 | Canola | nucleus | 83.21 | 86.51 |
| Bra022786.1-P | Field mustard | nucleus | 82.44 | 85.71 |
| CDX84848 | Canola | nucleus | 82.19 | 85.45 |
| CDY29685 | Canola | nucleus | 74.81 | 84.0 |
| Bra021623.1-P | Field mustard | nucleus | 74.81 | 84.0 |
| Bra018325.1-P | Field mustard | nucleus | 79.64 | 83.91 |
| CDY10720 | Canola | nucleus | 79.39 | 83.65 |
| CDY02051 | Canola | nucleus | 58.52 | 83.03 |
| CDX97834 | Canola | nucleus | 75.32 | 81.99 |
| AT5G07100.1 | Thale cress | nucleus | 38.68 | 49.19 |
| TraesCS1A01G070400.1 | Wheat | nucleus | 42.49 | 37.95 |
| TraesCS1B01G088900.2 | Wheat | nucleus | 41.98 | 36.03 |
| Os05t0343400-01 | Rice | nucleus | 44.53 | 35.93 |
| TraesCS1D01G072900.1 | Wheat | nucleus | 41.98 | 35.56 |
| Zm00001d010399_P001 | Maize | nucleus | 44.78 | 35.34 |
| Zm00001d038023_P001 | Maize | nucleus | 43.77 | 35.17 |
| KXG21728 | Sorghum | nucleus | 44.27 | 33.66 |
| AT2G38470.1 | Thale cress | nucleus, plastid | 42.75 | 32.37 |
| KRH76058 | Soybean | nucleus | 39.19 | 30.37 |
| KRH65526 | Soybean | nucleus | 38.93 | 30.18 |
| KRH00362 | Soybean | nucleus | 41.48 | 30.13 |
| KRH40825 | Soybean | nucleus | 41.22 | 29.83 |
| AT1G13960.1 | Thale cress | nucleus | 35.37 | 27.04 |
| AT3G01080.2 | Thale cress | nucleus | 31.55 | 26.9 |
| AT2G03340.1 | Thale cress | nucleus | 34.86 | 26.71 |
| AT2G37260.1 | Thale cress | nucleus | 27.48 | 25.17 |
| AT4G26640.2 | Thale cress | nucleus | 35.11 | 24.78 |
| AT4G26440.1 | Thale cress | nucleus | 35.11 | 24.3 |
| AT5G56270.1 | Thale cress | nucleus | 37.91 | 21.69 |
| AT2G04880.1 | Thale cress | nucleus | 24.17 | 19.51 |
| AT4G30935.1 | Thale cress | nucleus | 21.63 | 18.24 |
| AT1G55600.1 | Thale cress | nucleus | 20.1 | 16.29 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:817575 | ProteinID:AAC16930.1 | ProteinID:AAM14918.1 | ProteinID:AEC08362.1 |
| EMBL:AF418309 | ArrayExpress:AT2G30250 | EnsemblPlantsGene:AT2G30250 | RefSeq:AT2G30250 | TAIR:AT2G30250 | RefSeq:AT2G30250-TAIR-G |
| EnsemblPlants:AT2G30250.1 | TAIR:AT2G30250.1 | EMBL:AY045813 | EMBL:AY062720 | EMBL:AY114650 | EMBL:AY136318 |
| Unigene:At.12235 | EMBL:BT002338 | EMBL:BT008482 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006970 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009409 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009987 | GO:GO:0034605 | GO:GO:0043565 | GO:GO:0070370 | InterPro:IPR003657 | InterPro:IPR036576 |
| RefSeq:NP_180584.1 | UniProt:O22921 | PFAM:PF03106 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00000010A5 | Symbol:WRKY25 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
WRKY25Probable WRKY transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:O22921]
Coordinates
chr2:-:12903208..12905338
Molecular Weight (calculated)
44135.9 Da
IEP (calculated)
6.432
GRAVY (calculated)
-0.919
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTSFTDLL GSSGVDCYED DEDLRVSGSS FGGYYPERTG SGLPKFKTAQ PPPLPISQSS HNFTFSDYLD SPLLLSSSHS LISPTTGTFP LQGFNGTTNN
101: HSDFPWQLQS QPSNASSALQ ETYGVQDHEK KQEMIPNEIA TQNNNQSFGT ERQIKIPAYM VSRNSNDGYG WRKYGQKQVK KSENPRSYFK CTYPDCVSKK
201: IVETASDGQI TEIIYKGGHN HPKPEFTKRP SQSSLPSSVN GRRLFNPASV VSEPHDQSEN SSISFDYSDL EQKSFKSEYG EIDEEEEQPE MKRMKREGED
301: EGMSIEVSKG VKEPRVVVQT ISDIDVLIDG FRWRKYGQKV VKGNTNPRSY YKCTFQGCGV KKQVERSAAD ERAVLTTYEG RHNHDIPTAL RRS
101: HSDFPWQLQS QPSNASSALQ ETYGVQDHEK KQEMIPNEIA TQNNNQSFGT ERQIKIPAYM VSRNSNDGYG WRKYGQKQVK KSENPRSYFK CTYPDCVSKK
201: IVETASDGQI TEIIYKGGHN HPKPEFTKRP SQSSLPSSVN GRRLFNPASV VSEPHDQSEN SSISFDYSDL EQKSFKSEYG EIDEEEEQPE MKRMKREGED
301: EGMSIEVSKG VKEPRVVVQT ISDIDVLIDG FRWRKYGQKV VKGNTNPRSY YKCTFQGCGV KKQVERSAAD ERAVLTTYEG RHNHDIPTAL RRS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.