Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021623.1-P | Field mustard | nucleus | 99.43 | 99.43 |
| CDX97834 | Canola | nucleus | 97.14 | 94.18 |
| CDY10720 | Canola | nucleus | 89.71 | 84.18 |
| CDY02051 | Canola | nucleus | 65.43 | 82.67 |
| CDY24017 | Canola | nucleus | 88.0 | 81.48 |
| CDX84848 | Canola | nucleus | 86.29 | 79.89 |
| AT2G30250.1 | Thale cress | nucleus | 84.0 | 74.81 |
| CDY05016 | Canola | nucleus | 42.0 | 46.08 |
| CDY14055 | Canola | nucleus | 41.43 | 45.45 |
| TraesCS1A01G070400.1 | Wheat | nucleus | 46.86 | 37.27 |
| TraesCS1B01G088900.2 | Wheat | nucleus | 46.29 | 35.37 |
| TraesCS1D01G072900.1 | Wheat | nucleus | 46.86 | 35.34 |
| Zm00001d010399_P001 | Maize | nucleus | 48.57 | 34.14 |
| Os05t0343400-01 | Rice | nucleus | 47.43 | 34.09 |
| CDY65564 | Canola | nucleus, plastid | 45.43 | 33.76 |
| Zm00001d038023_P001 | Maize | nucleus | 47.14 | 33.74 |
| CDY07729 | Canola | nucleus | 44.86 | 33.19 |
| CDY69941 | Canola | nucleus, plastid | 45.14 | 33.12 |
| CDX91470 | Canola | nucleus, plastid | 44.86 | 32.98 |
| CDY18383 | Canola | nucleus, plastid | 45.14 | 32.85 |
| KXG21728 | Sorghum | nucleus | 48.29 | 32.69 |
| CDY14459 | Canola | nucleus, plastid | 44.57 | 31.84 |
| CDY36419 | Canola | nucleus | 38.86 | 29.89 |
| KRH00362 | Soybean | nucleus | 46.0 | 29.76 |
| CDX98138 | Canola | nucleus | 38.86 | 29.76 |
| CDY62213 | Canola | nucleus | 39.43 | 29.74 |
| CDY33788 | Canola | nucleus | 37.14 | 29.41 |
| CDX96873 | Canola | nucleus | 39.14 | 29.4 |
| CDY48650 | Canola | nucleus, plastid | 37.14 | 29.35 |
| KRH40825 | Soybean | nucleus | 45.14 | 29.1 |
| KRH76058 | Soybean | nucleus | 42.0 | 28.99 |
| KRH65526 | Soybean | nucleus | 41.71 | 28.8 |
| CDY53941 | Canola | nucleus | 36.0 | 28.64 |
| CDY16122 | Canola | nucleus | 36.57 | 28.57 |
| CDY03003 | Canola | nucleus | 38.57 | 27.61 |
| CDY45169 | Canola | nucleus | 38.0 | 27.37 |
| CDX74976 | Canola | nucleus | 30.0 | 26.38 |
| CDY37191 | Canola | nucleus | 36.57 | 26.34 |
| CDY70490 | Canola | nucleus | 38.29 | 25.87 |
| CDX74281 | Canola | nucleus | 32.86 | 25.5 |
| CDX91348 | Canola | nucleus | 29.14 | 25.37 |
| CDY42736 | Canola | nucleus | 37.71 | 24.95 |
| CDX94303 | Canola | nucleus | 37.43 | 24.62 |
| CDX94335 | Canola | nucleus | 36.0 | 24.51 |
| CDX92808 | Canola | nucleus | 36.57 | 24.43 |
| CDX89317 | Canola | nucleus | 37.14 | 24.34 |
| CDY69527 | Canola | nucleus | 37.71 | 24.31 |
| CDY46692 | Canola | nucleus | 36.29 | 24.19 |
| CDX97359 | Canola | nucleus | 36.86 | 24.02 |
| CDY14304 | Canola | nucleus | 37.14 | 23.77 |
| CDX89336 | Canola | nucleus | 36.0 | 23.6 |
| CDY72350 | Canola | nucleus | 9.71 | 23.45 |
| CDX93073 | Canola | nucleus | 24.57 | 23.37 |
| CDY62293 | Canola | nucleus | 13.14 | 22.66 |
| CDY36788 | Canola | nucleus | 40.0 | 22.44 |
| CDY11947 | Canola | nucleus | 36.29 | 22.13 |
| CDY62292 | Canola | nucleus | 12.86 | 21.63 |
| CDY49388 | Canola | nucleus | 41.14 | 21.46 |
| CDY50038 | Canola | nucleus | 26.57 | 21.33 |
| CDX79729 | Canola | nucleus | 18.86 | 20.5 |
| CDY46769 | Canola | nucleus | 18.86 | 20.43 |
| CDY46768 | Canola | nucleus | 18.86 | 20.43 |
| CDY36463 | Canola | nucleus | 23.14 | 20.3 |
| CDY47543 | Canola | nucleus | 16.0 | 19.79 |
| CDY47546 | Canola | nucleus | 21.43 | 19.08 |
| CDY23265 | Canola | nucleus | 23.71 | 18.16 |
| CDY26094 | Canola | nucleus | 21.43 | 18.03 |
| CDY08253 | Canola | nucleus | 21.43 | 18.03 |
| CDY32799 | Canola | nucleus | 30.86 | 17.97 |
| CDY10548 | Canola | nucleus | 20.0 | 16.24 |
| CDY59057 | Canola | nucleus | 20.0 | 15.66 |
| CDY13396 | Canola | nucleus | 23.71 | 15.63 |
| CDY52777 | Canola | nucleus, plastid | 6.86 | 14.04 |
| CDY67588 | Canola | nucleus | 18.0 | 12.21 |
| CDY54360 | Canola | nucleus | 18.0 | 11.33 |
| CDX72277 | Canola | nucleus | 23.43 | 11.19 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078GT95 | UniProt:A0A078GT95 | EnsemblPlants:CDY29685 | ProteinID:CDY29685 |
| ProteinID:CDY29685.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00043455001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEE6A0 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA04g17420DBnaA04g17420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GT95]
Coordinates
chrLK032241:+:309060..310932
Molecular Weight (calculated)
39217.6 Da
IEP (calculated)
7.035
GRAVY (calculated)
-0.834
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTSFTDLL ASSGVDPYEQ DEDFLGGFFP EETGSGLPKF KTAQPPPLPI SQSSRSFAFS ELLDSPLLLS SSHSLISPTT GAFPFQGFNG SDFPWQLPSQ
101: TQTQPQNAAS ALQETYGVQD LQKKLEDPVP REGKVPSYMV SRNSNDGYGW RKYGQKQVKK SENPRSYFKC TYPNCVSKKI VETASDGQIT EIIYKGGHNH
201: PKPEFTKRPS SSARRMFNPS SVVSEQSESS SISFDYGEVD EEKEQLDIKR LKREGEDEGM SVEVSRGVKE PRVVVQTISE IDVLIDGFRW RKYGQKVVKG
301: NTNPRSYYKC TYQGCGVRKQ VERSAEDERA VLTTYEGRHN HDVPTAPRRS
101: TQTQPQNAAS ALQETYGVQD LQKKLEDPVP REGKVPSYMV SRNSNDGYGW RKYGQKQVKK SENPRSYFKC TYPNCVSKKI VETASDGQIT EIIYKGGHNH
201: PKPEFTKRPS SSARRMFNPS SVVSEQSESS SISFDYGEVD EEKEQLDIKR LKREGEDEGM SVEVSRGVKE PRVVVQTISE IDVLIDGFRW RKYGQKVVKG
301: NTNPRSYYKC TYQGCGVRKQ VERSAEDERA VLTTYEGRHN HDVPTAPRRS
001: MSSTSFTDLL GSSGVDCYED DEDLRVSGSS FGGYYPERTG SGLPKFKTAQ PPPLPISQSS HNFTFSDYLD SPLLLSSSHS LISPTTGTFP LQGFNGTTNN
101: HSDFPWQLQS QPSNASSALQ ETYGVQDHEK KQEMIPNEIA TQNNNQSFGT ERQIKIPAYM VSRNSNDGYG WRKYGQKQVK KSENPRSYFK CTYPDCVSKK
201: IVETASDGQI TEIIYKGGHN HPKPEFTKRP SQSSLPSSVN GRRLFNPASV VSEPHDQSEN SSISFDYSDL EQKSFKSEYG EIDEEEEQPE MKRMKREGED
301: EGMSIEVSKG VKEPRVVVQT ISDIDVLIDG FRWRKYGQKV VKGNTNPRSY YKCTFQGCGV KKQVERSAAD ERAVLTTYEG RHNHDIPTAL RRS
101: HSDFPWQLQS QPSNASSALQ ETYGVQDHEK KQEMIPNEIA TQNNNQSFGT ERQIKIPAYM VSRNSNDGYG WRKYGQKQVK KSENPRSYFK CTYPDCVSKK
201: IVETASDGQI TEIIYKGGHN HPKPEFTKRP SQSSLPSSVN GRRLFNPASV VSEPHDQSEN SSISFDYSDL EQKSFKSEYG EIDEEEEQPE MKRMKREGED
301: EGMSIEVSKG VKEPRVVVQT ISDIDVLIDG FRWRKYGQKV VKGNTNPRSY YKCTFQGCGV KKQVERSAAD ERAVLTTYEG RHNHDIPTAL RRS
Arabidopsis Description
WRKY25Probable WRKY transcription factor 25 [Source:UniProtKB/Swiss-Prot;Acc:O22921]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.