Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08253 | Canola | nucleus | 98.08 | 98.08 |
| Bra037106.1-P | Field mustard | nucleus | 97.84 | 94.21 |
| CDY72350 | Canola | nucleus | 18.51 | 53.1 |
| CDY62292 | Canola | nucleus | 25.96 | 51.92 |
| CDY10548 | Canola | nucleus | 52.88 | 51.04 |
| CDY59057 | Canola | nucleus | 53.37 | 49.66 |
| CDY47546 | Canola | nucleus | 46.15 | 48.85 |
| CDY62293 | Canola | nucleus | 23.56 | 48.28 |
| AT1G55600.1 | Thale cress | nucleus | 52.4 | 44.95 |
| CDY47543 | Canola | nucleus | 29.09 | 42.76 |
| CDY67588 | Canola | nucleus | 47.12 | 37.98 |
| CDY54360 | Canola | nucleus | 50.72 | 37.95 |
| CDY02051 | Canola | nucleus | 18.03 | 27.08 |
| CDY29685 | Canola | nucleus | 18.03 | 21.43 |
| CDY14055 | Canola | nucleus | 16.35 | 21.32 |
| CDY05016 | Canola | nucleus | 16.35 | 21.32 |
| CDX97834 | Canola | nucleus | 17.79 | 20.5 |
| CDY10720 | Canola | nucleus | 18.27 | 20.38 |
| CDY24017 | Canola | nucleus | 17.55 | 19.31 |
| CDY53941 | Canola | nucleus | 20.19 | 19.09 |
| CDY18383 | Canola | nucleus, plastid | 21.88 | 18.92 |
| CDY32799 | Canola | nucleus | 27.16 | 18.8 |
| CDX84848 | Canola | nucleus | 17.07 | 18.78 |
| CDY62213 | Canola | nucleus | 20.91 | 18.75 |
| CDX91470 | Canola | nucleus, plastid | 21.39 | 18.7 |
| CDY65564 | Canola | nucleus, plastid | 21.15 | 18.68 |
| CDX94335 | Canola | nucleus | 23.08 | 18.68 |
| CDY69941 | Canola | nucleus, plastid | 21.39 | 18.66 |
| CDX89336 | Canola | nucleus | 23.8 | 18.54 |
| CDY42736 | Canola | nucleus | 23.56 | 18.53 |
| CDY45169 | Canola | nucleus | 21.63 | 18.52 |
| CDX96873 | Canola | nucleus | 20.67 | 18.45 |
| CDX98138 | Canola | nucleus | 20.19 | 18.38 |
| CDX79729 | Canola | nucleus | 14.18 | 18.32 |
| CDY46768 | Canola | nucleus | 14.18 | 18.27 |
| CDY46769 | Canola | nucleus | 14.18 | 18.27 |
| CDY36419 | Canola | nucleus | 19.95 | 18.24 |
| CDY07729 | Canola | nucleus | 20.67 | 18.18 |
| CDY11947 | Canola | nucleus | 25.0 | 18.12 |
| CDY69527 | Canola | nucleus | 23.56 | 18.05 |
| CDY03003 | Canola | nucleus | 21.15 | 18.0 |
| CDY48650 | Canola | nucleus, plastid | 18.99 | 17.83 |
| CDY14459 | Canola | nucleus, plastid | 20.91 | 17.76 |
| CDY36788 | Canola | nucleus | 25.96 | 17.31 |
| CDY37191 | Canola | nucleus | 20.19 | 17.28 |
| CDY49388 | Canola | nucleus | 27.4 | 16.99 |
| CDY33788 | Canola | nucleus | 18.03 | 16.97 |
| CDX74281 | Canola | nucleus | 18.27 | 16.85 |
| KRH34226 | Soybean | nucleus | 12.5 | 15.48 |
| CDY16122 | Canola | nucleus | 16.59 | 15.4 |
| CDY70490 | Canola | nucleus | 18.03 | 14.48 |
| CDX91348 | Canola | nucleus | 13.7 | 14.18 |
| CDX93073 | Canola | nucleus | 12.5 | 14.13 |
| CDX74976 | Canola | nucleus | 13.46 | 14.07 |
| CDX89317 | Canola | nucleus | 18.03 | 14.04 |
| CDX92808 | Canola | nucleus | 17.55 | 13.93 |
| CDX94303 | Canola | nucleus | 17.79 | 13.91 |
| KRH34224 | Soybean | nucleus | 12.26 | 13.9 |
| CDX97359 | Canola | nucleus | 17.07 | 13.22 |
| CDY14304 | Canola | nucleus | 17.31 | 13.16 |
| CDY46692 | Canola | nucleus | 16.59 | 13.14 |
| CDY50038 | Canola | nucleus | 13.7 | 13.07 |
| CDY36463 | Canola | nucleus | 11.78 | 12.28 |
| CDY23265 | Canola | nucleus | 12.26 | 11.16 |
| CDY52777 | Canola | nucleus, plastid | 4.57 | 11.11 |
| CDY13396 | Canola | nucleus | 12.02 | 9.42 |
| CDX72277 | Canola | nucleus | 11.3 | 6.41 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078GLJ1 | UniProt:A0A078GLJ1 | EnsemblPlants:CDY26094 | ProteinID:CDY26094 |
| ProteinID:CDY26094.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00034713001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31221 | PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEAE48 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC06g11020DBnaC06g11020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLJ1]
Coordinates
chrLK032185:+:173998..176137
Molecular Weight (calculated)
46225.0 Da
IEP (calculated)
4.918
GRAVY (calculated)
-0.663
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MNAFDGTYRG VRTCWAAPSS PSPRSLLAML NQGDNNDVVD QINEIFPQTN HQPEQRSSLR ERVAARVEFN LPPLETQNNR PFAAFFRNPS TTVPSPLVLI
101: SPGFSPSAML QFPNMFIDPS HMILPSPVAN GGPPEAVESS GADHATMMIS NNDPMHVALP PQQVAAFGSG PTVNETDLIN MEIDRKNEDE EEYKEDEDEE
201: HNIVDELDAE PSSPKRRKFG ESTMIGATRS CKSQRVIIQM ETEENNPDDG FRWRKYGQKV VKGNPNPRSY YKCTYTACDV KKHVERGAED VKFLLVTYDG
301: IHEHDPPAAR GSSSSGLKGQ YSSSVSQDHN NHRTVPPSSS SASEALRLFP SSLDPPVDMT QFYMTGLAKL PSLPVNQNHG LMNWNVEPEI DRVIPDGTEV
401: FKGIRDRLNL NFGLNL
101: SPGFSPSAML QFPNMFIDPS HMILPSPVAN GGPPEAVESS GADHATMMIS NNDPMHVALP PQQVAAFGSG PTVNETDLIN MEIDRKNEDE EEYKEDEDEE
201: HNIVDELDAE PSSPKRRKFG ESTMIGATRS CKSQRVIIQM ETEENNPDDG FRWRKYGQKV VKGNPNPRSY YKCTYTACDV KKHVERGAED VKFLLVTYDG
301: IHEHDPPAAR GSSSSGLKGQ YSSSVSQDHN NHRTVPPSSS SASEALRLFP SSLDPPVDMT QFYMTGLAKL PSLPVNQNHG LMNWNVEPEI DRVIPDGTEV
401: FKGIRDRLNL NFGLNL
001: MSDFDENFIE MTSYWAPPSS PSPRTILAML EQTDNGLNPI SEIFPQESLP RDHTDQSGQR SGLRERLAAR VGFNLPTLNT EENMSPLDAF FRSSNVPNSP
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM
Arabidopsis Description
WRKY10Probable WRKY transcription factor 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LG05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.