Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024780.1-P | Field mustard | nucleus | 94.89 | 95.47 |
| CDY45169 | Canola | nucleus | 94.48 | 95.06 |
| CDY53941 | Canola | nucleus | 72.8 | 80.91 |
| AT2G03340.1 | Thale cress | nucleus | 81.8 | 77.97 |
| CDY37191 | Canola | nucleus | 76.89 | 77.37 |
| CDY52777 | Canola | nucleus, plastid | 26.99 | 77.19 |
| CDY36419 | Canola | nucleus | 62.37 | 67.03 |
| CDY62213 | Canola | nucleus | 63.39 | 66.81 |
| CDY33788 | Canola | nucleus | 60.33 | 66.74 |
| CDX98138 | Canola | nucleus | 62.37 | 66.74 |
| CDX96873 | Canola | nucleus | 62.78 | 65.88 |
| CDY16122 | Canola | nucleus | 58.69 | 64.06 |
| VIT_01s0011g00220.t01 | Wine grape | nucleus | 57.46 | 55.98 |
| KRH70820 | Soybean | nucleus, plastid | 40.49 | 54.4 |
| KRH74950 | Soybean | nucleus | 50.1 | 53.85 |
| PGSC0003DMT400072836 | Potato | nucleus | 54.81 | 52.76 |
| Solyc05g012770.2.1 | Tomato | nucleus | 54.6 | 52.56 |
| KRG89512 | Soybean | nucleus | 46.42 | 51.71 |
| KRH50544 | Soybean | nucleus | 46.01 | 50.91 |
| CDX74281 | Canola | nucleus | 38.24 | 41.46 |
| CDY05016 | Canola | nucleus | 26.99 | 41.38 |
| CDY14055 | Canola | nucleus | 26.99 | 41.38 |
| CDY29685 | Canola | nucleus | 27.61 | 38.57 |
| CDY10720 | Canola | nucleus | 29.04 | 38.07 |
| CDX97834 | Canola | nucleus | 27.61 | 37.4 |
| CDY24017 | Canola | nucleus | 27.61 | 35.71 |
| CDX84848 | Canola | nucleus | 26.99 | 34.92 |
| CDY02051 | Canola | nucleus | 19.22 | 33.94 |
| CDY65564 | Canola | nucleus, plastid | 32.11 | 33.33 |
| CDX91470 | Canola | nucleus, plastid | 32.11 | 32.98 |
| CDY07729 | Canola | nucleus | 31.49 | 32.56 |
| CDY69941 | Canola | nucleus, plastid | 31.49 | 32.29 |
| CDY18383 | Canola | nucleus, plastid | 31.49 | 32.02 |
| CDY14459 | Canola | nucleus, plastid | 31.7 | 31.63 |
| CDX74976 | Canola | nucleus | 24.34 | 29.9 |
| CDY70490 | Canola | nucleus | 31.08 | 29.34 |
| CDY72350 | Canola | nucleus | 8.59 | 28.97 |
| CDY48650 | Canola | nucleus, plastid | 25.97 | 28.67 |
| CDX94335 | Canola | nucleus | 30.06 | 28.6 |
| CDX89317 | Canola | nucleus | 31.08 | 28.46 |
| CDX91348 | Canola | nucleus | 23.31 | 28.36 |
| CDX94303 | Canola | nucleus | 30.67 | 28.2 |
| CDY69527 | Canola | nucleus | 31.08 | 27.99 |
| CDX89336 | Canola | nucleus | 30.47 | 27.9 |
| CDX97359 | Canola | nucleus | 30.47 | 27.75 |
| CDY14304 | Canola | nucleus | 30.88 | 27.61 |
| CDY42736 | Canola | nucleus | 29.86 | 27.6 |
| CDX92808 | Canola | nucleus | 29.45 | 27.48 |
| CDY46692 | Canola | nucleus | 29.45 | 27.43 |
| CDY11947 | Canola | nucleus | 31.29 | 26.66 |
| CDY62293 | Canola | nucleus | 10.84 | 26.11 |
| CDX93073 | Canola | nucleus | 19.43 | 25.82 |
| CDY36463 | Canola | nucleus | 21.06 | 25.81 |
| CDY36788 | Canola | nucleus | 32.92 | 25.8 |
| CDY49388 | Canola | nucleus | 34.97 | 25.48 |
| CDY62292 | Canola | nucleus | 10.63 | 25.0 |
| CDX79729 | Canola | nucleus | 16.16 | 24.53 |
| CDY46768 | Canola | nucleus | 16.16 | 24.46 |
| CDY46769 | Canola | nucleus | 16.16 | 24.46 |
| CDY50038 | Canola | nucleus | 21.47 | 24.08 |
| CDY23265 | Canola | nucleus | 22.29 | 23.85 |
| CDY32799 | Canola | nucleus | 26.18 | 21.3 |
| CDY08253 | Canola | nucleus | 18.0 | 21.15 |
| CDY26094 | Canola | nucleus | 18.0 | 21.15 |
| CDY10548 | Canola | nucleus | 18.4 | 20.88 |
| CDY47543 | Canola | nucleus | 12.07 | 20.85 |
| CDY59057 | Canola | nucleus | 18.81 | 20.58 |
| CDY47546 | Canola | nucleus | 16.16 | 20.1 |
| CDY13396 | Canola | nucleus | 21.68 | 19.96 |
| CDX72277 | Canola | nucleus | 21.88 | 14.6 |
| CDY67588 | Canola | nucleus | 15.34 | 14.53 |
| CDY54360 | Canola | nucleus | 15.75 | 13.85 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | unigene:Bna.28322 | EnsemblPlants:CDY03003 | ProteinID:CDY03003 | ProteinID:CDY03003.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00115304001 |
| InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF84 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0003D95761 | GO:V9LYK9 | UniProt:V9LYK9 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC07g22240DBnaC07g22240D protein [Source:UniProtKB/TrEMBL;Acc:V9LYK9]
Coordinates
chrLK031939:+:208248..210677
Molecular Weight (calculated)
53645.4 Da
IEP (calculated)
8.221
GRAVY (calculated)
-0.830
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MADKEEQEVE HQQKQPSTLK SSTGAPSRPT ISLPPRPFGE MFFSGGLGFS PGPMTLVSNL FSDPDELKTF SQLLAGAMAS PAAAVAAAAV VATAHQTPVS
101: SVGGSGGDVD PRFKQNRPTG LMIAQPPAMF TVPPGLSPAT LLDSPSFFGL FSPIQGAFGM THQQALAQVT AQAVQGNGVQ IQSQSEYPSS TQQQETSSEP
201: MSQLPALAQR DTVEVSVYEH RSSQPQNADK PADDGYNWRK YGQKQVKGSD FPRSYYKCTH PACPVKKKVE RSQDGQVTEI IYKGQHSHEP PQNKTKRDNN
301: GSSRSSDVAT QFHTSNSGLN KNKRDQETSQ VTTTTEQMCD ASDSDETSVE PDPKRRNMEV RVTEPVTSTQ RTVTEPRIIV QTTSEVDLLD DGFRWRKYGQ
401: KVVKGNPYPR SYYKCTTPGC GVRKHVERAA SDPKAVVTTY EGKHNHDVPA ARNSSHQLRP NNNLHNTTVD NMNQEQRVAR LRLKEEQIT
101: SVGGSGGDVD PRFKQNRPTG LMIAQPPAMF TVPPGLSPAT LLDSPSFFGL FSPIQGAFGM THQQALAQVT AQAVQGNGVQ IQSQSEYPSS TQQQETSSEP
201: MSQLPALAQR DTVEVSVYEH RSSQPQNADK PADDGYNWRK YGQKQVKGSD FPRSYYKCTH PACPVKKKVE RSQDGQVTEI IYKGQHSHEP PQNKTKRDNN
301: GSSRSSDVAT QFHTSNSGLN KNKRDQETSQ VTTTTEQMCD ASDSDETSVE PDPKRRNMEV RVTEPVTSTQ RTVTEPRIIV QTTSEVDLLD DGFRWRKYGQ
401: KVVKGNPYPR SYYKCTTPGC GVRKHVERAA SDPKAVVTTY EGKHNHDVPA ARNSSHQLRP NNNLHNTTVD NMNQEQRVAR LRLKEEQIT
001: MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS NLFSDPDEFK SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT
Arabidopsis Description
WRKY3Putative WRKY DNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WPM8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.