Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54360 | Canola | nucleus | 89.53 | 83.09 |
| Bra038006.1-P | Field mustard | nucleus | 99.22 | 78.29 |
| CDY72350 | Canola | nucleus | 14.15 | 50.34 |
| CDY62292 | Canola | nucleus | 19.57 | 48.56 |
| CDY08253 | Canola | nucleus | 38.18 | 47.36 |
| CDY26094 | Canola | nucleus | 37.98 | 47.12 |
| CDY10548 | Canola | nucleus | 38.95 | 46.64 |
| CDY59057 | Canola | nucleus | 39.92 | 46.09 |
| AT1G55600.1 | Thale cress | nucleus | 39.15 | 41.65 |
| CDY47546 | Canola | nucleus | 31.2 | 40.97 |
| CDY62293 | Canola | nucleus | 15.89 | 40.39 |
| CDY47543 | Canola | nucleus | 18.6 | 33.92 |
| CDY02051 | Canola | nucleus | 12.21 | 22.74 |
| CDX94335 | Canola | nucleus | 19.77 | 19.84 |
| CDX89336 | Canola | nucleus | 19.77 | 19.1 |
| CDY69527 | Canola | nucleus | 19.77 | 18.78 |
| CDY42736 | Canola | nucleus | 18.99 | 18.53 |
| CDY32799 | Canola | nucleus | 21.51 | 18.47 |
| CDY11947 | Canola | nucleus | 20.35 | 18.29 |
| CDY10720 | Canola | nucleus | 13.18 | 18.23 |
| CDY29685 | Canola | nucleus | 12.21 | 18.0 |
| CDY14055 | Canola | nucleus | 11.05 | 17.87 |
| CDY05016 | Canola | nucleus | 11.05 | 17.87 |
| CDX97834 | Canola | nucleus | 12.4 | 17.73 |
| CDX79729 | Canola | nucleus | 10.85 | 17.39 |
| CDY46769 | Canola | nucleus | 10.85 | 17.34 |
| CDY46768 | Canola | nucleus | 10.85 | 17.34 |
| CDY24017 | Canola | nucleus | 12.6 | 17.2 |
| CDX91470 | Canola | nucleus, plastid | 15.7 | 17.02 |
| CDY36788 | Canola | nucleus | 20.54 | 16.99 |
| CDY65564 | Canola | nucleus, plastid | 15.31 | 16.77 |
| CDY49388 | Canola | nucleus | 21.71 | 16.69 |
| CDX84848 | Canola | nucleus | 12.21 | 16.67 |
| CDY62213 | Canola | nucleus | 14.73 | 16.38 |
| CDY69941 | Canola | nucleus, plastid | 15.12 | 16.35 |
| CDX96873 | Canola | nucleus | 14.73 | 16.31 |
| CDY18383 | Canola | nucleus, plastid | 15.12 | 16.22 |
| CDY53941 | Canola | nucleus | 13.76 | 16.14 |
| CDY36419 | Canola | nucleus | 13.95 | 15.82 |
| CDY48650 | Canola | nucleus, plastid | 13.57 | 15.8 |
| CDX98138 | Canola | nucleus | 13.95 | 15.75 |
| CDY07729 | Canola | nucleus | 14.15 | 15.43 |
| CDY45169 | Canola | nucleus | 14.53 | 15.43 |
| CDY03003 | Canola | nucleus | 14.53 | 15.34 |
| KRH34226 | Soybean | nucleus | 9.88 | 15.18 |
| CDY14459 | Canola | nucleus, plastid | 14.34 | 15.1 |
| CDX74281 | Canola | nucleus | 13.18 | 15.08 |
| CDX93073 | Canola | nucleus | 10.66 | 14.95 |
| CDY33788 | Canola | nucleus | 12.79 | 14.93 |
| CDY70490 | Canola | nucleus | 14.92 | 14.86 |
| CDY37191 | Canola | nucleus | 13.95 | 14.81 |
| CDY16122 | Canola | nucleus | 12.6 | 14.51 |
| CDX94303 | Canola | nucleus | 14.92 | 14.47 |
| CDY14304 | Canola | nucleus | 15.31 | 14.44 |
| CDX89317 | Canola | nucleus | 14.73 | 14.23 |
| CDX97359 | Canola | nucleus | 14.73 | 14.15 |
| KRH34224 | Soybean | nucleus | 9.88 | 13.9 |
| CDX92808 | Canola | nucleus | 13.76 | 13.55 |
| CDY50038 | Canola | nucleus | 11.43 | 13.53 |
| CDX91348 | Canola | nucleus | 10.47 | 13.43 |
| CDY46692 | Canola | nucleus | 13.57 | 13.33 |
| CDX74976 | Canola | nucleus | 10.27 | 13.32 |
| CDY36463 | Canola | nucleus | 8.91 | 11.53 |
| CDY23265 | Canola | nucleus | 9.11 | 10.28 |
| CDY52777 | Canola | nucleus, plastid | 2.91 | 8.77 |
| CDY13396 | Canola | nucleus | 8.91 | 8.66 |
| CDX72277 | Canola | nucleus | 9.11 | 6.41 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078JJ32 | UniProt:A0A078JJ32 | EnsemblPlants:CDY67588 | ProteinID:CDY67588 |
| ProteinID:CDY67588.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00065147001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EF4126 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng24700DBnaAnng24700D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JJ32]
Coordinates
chrLK036280:+:7320..9614
Molecular Weight (calculated)
57685.1 Da
IEP (calculated)
6.064
GRAVY (calculated)
-0.906
Length
516 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDYGDGNFM DMVSSRWAPP PSTSLSDNGL NPISDIFLQT NQSKQRPGLV DRVAARIGRN IPPIRTDNLS PCAVVFKDPK TVPFGIEISP GLSPSVMLQS
101: RSQLINPYSF PNDEPPETVE NSGDDHAKTM IFNKDVPYQP MHFDLPPQEA LIPSHVDPIG APLVASFESE VADDTDTKLM SLDDESESQD EEESNEDEDT
201: DDPSKLGRKR RIDEEEDDDI ADEHEVKPSS PKRRKYDEVS NMMTALRASN NPRVRLRMET EEAQPNDGHR WRKYGQKIVK GNPNPRSYYK CSHKGCIMKK
301: HVERAADDLR MLLVTYYGKH GHAAPLARSS SSSGPKNLYR SSVPARLGRP PFSSSSAAQD MRSFPYPSAS APRDMKRFGY PSALAPQAMR PFPSSLNPGV
401: DMTHLYKTGL SKLPSLPVNQ NHGFMDQNAE PWVNQNHGFM GQNAEPQVNQ NHGFMAQNAE PWVNQNHGFM GQNAEPRVNQ NHGFMSQNAE PRVNQNHGFM
501: GQNTEPWSNQ NHGFMG
101: RSQLINPYSF PNDEPPETVE NSGDDHAKTM IFNKDVPYQP MHFDLPPQEA LIPSHVDPIG APLVASFESE VADDTDTKLM SLDDESESQD EEESNEDEDT
201: DDPSKLGRKR RIDEEEDDDI ADEHEVKPSS PKRRKYDEVS NMMTALRASN NPRVRLRMET EEAQPNDGHR WRKYGQKIVK GNPNPRSYYK CSHKGCIMKK
301: HVERAADDLR MLLVTYYGKH GHAAPLARSS SSSGPKNLYR SSVPARLGRP PFSSSSAAQD MRSFPYPSAS APRDMKRFGY PSALAPQAMR PFPSSLNPGV
401: DMTHLYKTGL SKLPSLPVNQ NHGFMDQNAE PWVNQNHGFM GQNAEPQVNQ NHGFMAQNAE PWVNQNHGFM GQNAEPRVNQ NHGFMSQNAE PRVNQNHGFM
501: GQNTEPWSNQ NHGFMG
001: MSDFDENFIE MTSYWAPPSS PSPRTILAML EQTDNGLNPI SEIFPQESLP RDHTDQSGQR SGLRERLAAR VGFNLPTLNT EENMSPLDAF FRSSNVPNSP
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM
Arabidopsis Description
WRKY10Probable WRKY transcription factor 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LG05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.