Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59057 | Canola | nucleus | 97.91 | 94.41 |
| CDY08253 | Canola | nucleus | 51.28 | 53.12 |
| CDY72350 | Canola | nucleus | 17.87 | 53.1 |
| CDY26094 | Canola | nucleus | 51.04 | 52.88 |
| CDY62292 | Canola | nucleus | 24.36 | 50.48 |
| AT1G55600.1 | Thale cress | nucleus | 54.76 | 48.66 |
| CDY47546 | Canola | nucleus | 43.62 | 47.84 |
| CDY62293 | Canola | nucleus | 22.04 | 46.8 |
| CDY47543 | Canola | nucleus | 30.16 | 45.94 |
| CDY54360 | Canola | nucleus | 51.51 | 39.93 |
| CDY67588 | Canola | nucleus | 46.64 | 38.95 |
| CDY02051 | Canola | nucleus | 16.71 | 25.99 |
| CDY14055 | Canola | nucleus | 15.55 | 21.0 |
| CDY05016 | Canola | nucleus | 15.55 | 21.0 |
| CDY10720 | Canola | nucleus | 17.63 | 20.38 |
| CDY29685 | Canola | nucleus | 16.24 | 20.0 |
| CDY62213 | Canola | nucleus | 21.11 | 19.61 |
| CDY36419 | Canola | nucleus | 20.65 | 19.56 |
| CDY53941 | Canola | nucleus | 19.95 | 19.55 |
| CDX96873 | Canola | nucleus | 21.11 | 19.53 |
| CDX97834 | Canola | nucleus | 16.24 | 19.39 |
| CDX98138 | Canola | nucleus | 20.42 | 19.26 |
| CDY42736 | Canola | nucleus | 23.2 | 18.9 |
| CDY69527 | Canola | nucleus | 23.67 | 18.78 |
| CDY11947 | Canola | nucleus | 24.83 | 18.64 |
| CDX79729 | Canola | nucleus | 13.92 | 18.63 |
| CDY46769 | Canola | nucleus | 13.92 | 18.58 |
| CDY46768 | Canola | nucleus | 13.92 | 18.58 |
| CDY45169 | Canola | nucleus | 20.88 | 18.52 |
| CDY24017 | Canola | nucleus | 16.24 | 18.52 |
| CDY03003 | Canola | nucleus | 20.88 | 18.4 |
| CDY32799 | Canola | nucleus | 25.52 | 18.3 |
| CDX94335 | Canola | nucleus | 21.81 | 18.29 |
| CDX84848 | Canola | nucleus | 16.01 | 18.25 |
| CDX89336 | Canola | nucleus | 22.27 | 17.98 |
| CDY37191 | Canola | nucleus | 19.95 | 17.7 |
| CDY36788 | Canola | nucleus | 25.52 | 17.63 |
| CDX91470 | Canola | nucleus, plastid | 19.03 | 17.23 |
| CDY65564 | Canola | nucleus, plastid | 18.79 | 17.2 |
| CDY33788 | Canola | nucleus | 17.63 | 17.19 |
| CDY49388 | Canola | nucleus | 26.68 | 17.14 |
| CDY07729 | Canola | nucleus | 18.56 | 16.91 |
| CDY69941 | Canola | nucleus, plastid | 18.33 | 16.56 |
| CDY18383 | Canola | nucleus, plastid | 18.33 | 16.42 |
| CDX74281 | Canola | nucleus | 17.17 | 16.41 |
| CDY16122 | Canola | nucleus | 16.94 | 16.29 |
| CDY14459 | Canola | nucleus, plastid | 18.33 | 16.12 |
| CDY14304 | Canola | nucleus | 20.42 | 16.09 |
| KRH34226 | Soybean | nucleus | 12.53 | 16.07 |
| CDY48650 | Canola | nucleus, plastid | 16.47 | 16.03 |
| CDX97359 | Canola | nucleus | 19.49 | 15.64 |
| CDX89317 | Canola | nucleus | 19.26 | 15.54 |
| KRH34224 | Soybean | nucleus | 13.23 | 15.53 |
| CDY70490 | Canola | nucleus | 18.56 | 15.44 |
| CDX94303 | Canola | nucleus | 19.03 | 15.41 |
| CDX92808 | Canola | nucleus | 18.56 | 15.27 |
| CDX93073 | Canola | nucleus | 12.99 | 15.22 |
| CDY52777 | Canola | nucleus, plastid | 6.03 | 15.2 |
| CDX74976 | Canola | nucleus | 13.92 | 15.08 |
| CDY46692 | Canola | nucleus | 18.33 | 15.05 |
| CDX91348 | Canola | nucleus | 13.46 | 14.43 |
| CDY50038 | Canola | nucleus | 12.76 | 12.61 |
| CDY36463 | Canola | nucleus | 10.9 | 11.78 |
| CDY23265 | Canola | nucleus | 10.9 | 10.28 |
| CDY13396 | Canola | nucleus | 11.6 | 9.42 |
| CDX72277 | Canola | nucleus | 11.37 | 6.68 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078FEQ4 | UniProt:A0A078FEQ4 | EnsemblPlants:CDY10548 | ProteinID:CDY10548 |
| ProteinID:CDY10548.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00032507001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF46 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEAE96 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g70660DBnaC03g70660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEQ4]
Coordinates
chrLK032004:+:275164..277715
Molecular Weight (calculated)
48728.4 Da
IEP (calculated)
4.812
GRAVY (calculated)
-0.798
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDCDGIVRA MLEQTDNGLN SISQIFPKTN LSTDHQSEQR SSLGERVSSR IGFNVPPLET ENIMSPFAVS RSQTNVPSPL IAVSPGFSPS ALLQSPKKFS
101: NSFSQHIIQS PVANDGPPEM VESSGGDYAT TMIFNNDVPH QPMNFDHMPH HEGFYDIPTE ESVYVPSHES HADLIGAPLV TSFESDEVAN ETDIMNIISL
201: DSEDEDEDYK EDEEYKEYEN VDEEDDSVDE LPPRKRRKYE VSDMFGAKRS RKDERVILRM ECEEDNPDDG YQWRKYGRKI VNGNSNPRSY YKCTYGGCNV
301: KKHVERGADD VKLLVVTYDG KHNHPIPTGR SSNRSGPRNR SGFSVSQTPR LGRLPSSSSA CQYCYSSLEP HPDMALLYMT GLSKLQSFPV NHNHGFMYRH
401: DEPIIDRVIP DRTEVYNGMK DRLLPNFGFN F
101: NSFSQHIIQS PVANDGPPEM VESSGGDYAT TMIFNNDVPH QPMNFDHMPH HEGFYDIPTE ESVYVPSHES HADLIGAPLV TSFESDEVAN ETDIMNIISL
201: DSEDEDEDYK EDEEYKEYEN VDEEDDSVDE LPPRKRRKYE VSDMFGAKRS RKDERVILRM ECEEDNPDDG YQWRKYGRKI VNGNSNPRSY YKCTYGGCNV
301: KKHVERGADD VKLLVVTYDG KHNHPIPTGR SSNRSGPRNR SGFSVSQTPR LGRLPSSSSA CQYCYSSLEP HPDMALLYMT GLSKLQSFPV NHNHGFMYRH
401: DEPIIDRVIP DRTEVYNGMK DRLLPNFGFN F
001: MSDFDENFIE MTSYWAPPSS PSPRTILAML EQTDNGLNPI SEIFPQESLP RDHTDQSGQR SGLRERLAAR VGFNLPTLNT EENMSPLDAF FRSSNVPNSP
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM
101: VVAISPGFSP SALLHTPNMV SDSSQIIPPS SATNYGPLEM VETSGEDNAA MMMFNNDLPY QPYNVDLPSL EVFDDIATEE SFYIPSYEPH VDPIGTPLVT
201: SFESELVDDA HTDIISIEDS ESEDGNKDDD DEDFQYEDED EDQYDQDQDV DEDEEEEKDE DNVALDDPQP PPPKRRRYEV SNMIGATRTS KTQRIILQME
301: SDEDNPNDGY RWRKYGQKVV KGNPNPRSYF KCTNIECRVK KHVERGADNI KLVVTTYDGI HNHPSPPARR SNSSSRNRSA GATIPQNQND RTSRLGRAPP
401: TPTPPTPPPS SYTPEEMRPF SSLATEIDLT EVYMTGISML PNIPVYENSG FMYQNDEPTM NAMPDGSDVY DGIMERLYFK FGVDM
Arabidopsis Description
WRKY10Probable WRKY transcription factor 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LG05]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.