Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005210.1-P | Field mustard | nucleus | 96.23 | 93.64 |
| CDX91348 | Canola | nucleus | 91.96 | 91.04 |
| AT2G37260.1 | Thale cress | nucleus | 78.89 | 73.19 |
| CDY46769 | Canola | nucleus | 58.54 | 72.14 |
| CDY46768 | Canola | nucleus | 58.54 | 72.14 |
| CDX79729 | Canola | nucleus | 58.29 | 72.05 |
| VIT_08s0040g03070.t01 | Wine grape | nucleus | 48.49 | 40.46 |
| KRH67621 | Soybean | nucleus | 44.72 | 39.73 |
| KRG95903 | Soybean | nucleus | 45.48 | 38.43 |
| GSMUA_Achr1P17160_001 | Banana | nucleus | 36.18 | 35.04 |
| GSMUA_Achr4P16840_001 | Banana | nucleus | 36.18 | 34.2 |
| Solyc10g084380.1.1 | Tomato | nucleus | 35.43 | 33.41 |
| PGSC0003DMT400028530 | Potato | nucleus | 38.69 | 32.98 |
| CDY05016 | Canola | nucleus | 25.38 | 31.66 |
| CDY14055 | Canola | nucleus | 24.87 | 31.03 |
| CDY29685 | Canola | nucleus | 26.38 | 30.0 |
| CDX97834 | Canola | nucleus | 26.38 | 29.09 |
| CDY10720 | Canola | nucleus | 25.88 | 27.61 |
| CDY53941 | Canola | nucleus | 29.9 | 27.05 |
| CDY24017 | Canola | nucleus | 25.38 | 26.72 |
| CDX84848 | Canola | nucleus | 25.38 | 26.72 |
| CDX98138 | Canola | nucleus | 30.4 | 26.48 |
| CDY33788 | Canola | nucleus | 29.4 | 26.47 |
| CDX96873 | Canola | nucleus | 30.9 | 26.39 |
| CDY36419 | Canola | nucleus | 30.15 | 26.37 |
| CDY62213 | Canola | nucleus | 30.65 | 26.29 |
| CDY16122 | Canola | nucleus | 28.89 | 25.67 |
| CDY37191 | Canola | nucleus | 30.15 | 24.69 |
| CDY03003 | Canola | nucleus | 29.9 | 24.34 |
| CDY45169 | Canola | nucleus | 29.65 | 24.28 |
| CDY69941 | Canola | nucleus, plastid | 28.39 | 23.69 |
| CDY65564 | Canola | nucleus, plastid | 27.89 | 23.57 |
| CDX91470 | Canola | nucleus, plastid | 27.89 | 23.32 |
| CDY18383 | Canola | nucleus, plastid | 28.14 | 23.28 |
| CDX74281 | Canola | nucleus | 26.38 | 23.28 |
| CDY02051 | Canola | nucleus | 16.08 | 23.1 |
| CDY07729 | Canola | nucleus | 26.88 | 22.62 |
| CDX93073 | Canola | nucleus | 20.6 | 22.28 |
| CDX94335 | Canola | nucleus | 28.64 | 22.18 |
| CDY72350 | Canola | nucleus | 8.04 | 22.07 |
| CDY14459 | Canola | nucleus, plastid | 27.14 | 22.04 |
| CDY70490 | Canola | nucleus | 27.89 | 21.43 |
| CDY69527 | Canola | nucleus | 29.15 | 21.36 |
| CDX89336 | Canola | nucleus | 28.64 | 21.35 |
| CDY42736 | Canola | nucleus | 27.89 | 20.98 |
| CDY48650 | Canola | nucleus, plastid | 22.11 | 19.86 |
| CDY50038 | Canola | nucleus | 21.61 | 19.72 |
| CDY11947 | Canola | nucleus | 28.39 | 19.69 |
| CDX89317 | Canola | nucleus | 26.38 | 19.66 |
| CDY46692 | Canola | nucleus | 25.88 | 19.62 |
| CDX97359 | Canola | nucleus | 26.38 | 19.55 |
| CDX94303 | Canola | nucleus | 26.13 | 19.55 |
| CDY14304 | Canola | nucleus | 26.63 | 19.38 |
| CDX92808 | Canola | nucleus | 25.38 | 19.27 |
| CDY49388 | Canola | nucleus | 32.16 | 19.08 |
| CDY36788 | Canola | nucleus | 29.65 | 18.91 |
| CDY36463 | Canola | nucleus | 18.84 | 18.8 |
| CDY62293 | Canola | nucleus | 9.55 | 18.72 |
| CDY62292 | Canola | nucleus | 9.05 | 17.31 |
| CDY23265 | Canola | nucleus | 19.1 | 16.63 |
| CDY47543 | Canola | nucleus | 11.31 | 15.9 |
| CDY32799 | Canola | nucleus | 22.86 | 15.14 |
| CDY10548 | Canola | nucleus | 15.08 | 13.92 |
| CDY13396 | Canola | nucleus | 18.34 | 13.75 |
| CDY59057 | Canola | nucleus | 15.33 | 13.65 |
| CDY26094 | Canola | nucleus | 14.07 | 13.46 |
| CDY08253 | Canola | nucleus | 14.07 | 13.46 |
| CDY47546 | Canola | nucleus | 13.07 | 13.23 |
| CDY67588 | Canola | nucleus | 13.32 | 10.27 |
| CDY54360 | Canola | nucleus | 14.32 | 10.25 |
| CDX72277 | Canola | nucleus | 18.34 | 9.96 |
| CDY52777 | Canola | nucleus, plastid | 3.52 | 8.19 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078CD19 | EnsemblPlants:CDX74976 | ProteinID:CDX74976 | ProteinID:CDX74976.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00116991001 |
| InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF50 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE029A | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
BnaA05g07220D
Coordinates
chrLK031802:-:1739416..1740853
Molecular Weight (calculated)
43712.9 Da
IEP (calculated)
9.767
GRAVY (calculated)
-0.873
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVKESERKV VAKPVASRPS CSSVRTFTDL LADSVTVSPQ SNCHETVDAS IIIPKTERFK QPASASVSSP RVEGSGDVIY KPKSKLVSQA TVSALANMLP
101: GNCQLTWIKR EAVAYGKRVS QGTHRAGPNL IPRVPTFKES ETSTGDRSYV DGYNWRKYGH KQVKGSDSPR GYYKCTHPKC PVKKRVERSS MGGHVSEILY
201: QGEHNHSKPS CPLPRRASSS SSSGFQTPSE GLMGQEPNPL WSNQEKMNEG CVITPFEFAV PRTANSTGGT SDSGCRSSQC DERELDDPSR SKTSMKNEKQ
301: SSEAGVSQSS GESDSLGDGF KWRKYGQKAV GGNAYPRSYY RCTSVNCRAR KRVERANDDP KAFITTYEGK HNHHHLQLRP PTSSTLPFSS PQHSNQAI
101: GNCQLTWIKR EAVAYGKRVS QGTHRAGPNL IPRVPTFKES ETSTGDRSYV DGYNWRKYGH KQVKGSDSPR GYYKCTHPKC PVKKRVERSS MGGHVSEILY
201: QGEHNHSKPS CPLPRRASSS SSSGFQTPSE GLMGQEPNPL WSNQEKMNEG CVITPFEFAV PRTANSTGGT SDSGCRSSQC DERELDDPSR SKTSMKNEKQ
301: SSEAGVSQSS GESDSLGDGF KWRKYGQKAV GGNAYPRSYY RCTSVNCRAR KRVERANDDP KAFITTYEGK HNHHHLQLRP PTSSTLPFSS PQHSNQAI
001: MEVNDGERVV IAKPVASRPS SSSGFRTFTE LLTDSVTVSP QTTCHEIVDA AIRPKTLRFN QPVAASVSCP RAEVKGIGNG MSCDDDSDSR NYVVYKPKAK
101: LVSKATVSAL ANMLQGNRQQ TWRQSEAVSY GKSVSQGTHR AGPNLVQKVP SFTESETSTG DRSSVDGYNW RKYGQKQVKG SECPRSYYKC THPKCPVKKK
201: VERSVEGQVS EIVYQGEHNH SKPSCPLPRR ASSSISSGFQ KPPKSIASEG SMGQDPNNNL YSPLWNNQSN DSTQNRTEKM SEGCVITPFE FAVPRSTNSN
301: PGTSDSGCKS SQCDEGELDD PSRSKRRKNE KQSSEAGVSQ GSVESDSLED GFRWRKYGQK VVGGNAYPRS YYRCTSANCR ARKHVERASD DPRAFITTYE
401: GKHNHHLLLS PPSSSTLPFN SPQLSKQTI
101: LVSKATVSAL ANMLQGNRQQ TWRQSEAVSY GKSVSQGTHR AGPNLVQKVP SFTESETSTG DRSSVDGYNW RKYGQKQVKG SECPRSYYKC THPKCPVKKK
201: VERSVEGQVS EIVYQGEHNH SKPSCPLPRR ASSSISSGFQ KPPKSIASEG SMGQDPNNNL YSPLWNNQSN DSTQNRTEKM SEGCVITPFE FAVPRSTNSN
301: PGTSDSGCKS SQCDEGELDD PSRSKRRKNE KQSSEAGVSQ GSVESDSLED GFRWRKYGQK VVGGNAYPRS YYRCTSANCR ARKHVERASD DPRAFITTYE
401: GKHNHHLLLS PPSSSTLPFN SPQLSKQTI
Arabidopsis Description
WRKY44WRKY transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.