CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67621	Soybean	nucleus	89.6	94.2
VIT_08s0040g03070.t01	Wine grape	nucleus	65.82	64.99
GSMUA_Achr1P17160_001	Banana	nucleus	41.19	47.2
Bra023112.1-P	Field mustard	nucleus	41.61	46.67
AT2G37260.1	Thale cress	nucleus	42.46	46.62
PGSC0003DMT400028530	Potato	nucleus	45.65	46.04
Solyc10g084380.1.1	Tomato	nucleus	40.98	45.73
CDX74976	Canola	nucleus	38.43	45.48
Bra005210.1-P	Field mustard	nucleus	39.28	45.23
CDX91348	Canola	nucleus	38.0	44.53
CDY46768	Canola	nucleus	29.09	42.41
CDY46769	Canola	nucleus	29.09	42.41
CDX79729	Canola	nucleus	28.87	42.24
GSMUA_Achr4P16840_001	Banana	nucleus	36.31	40.62
KRH70820	Soybean	nucleus, plastid	27.6	35.71
KRG89512	Soybean	nucleus	31.42	33.71
KRH50544	Soybean	nucleus	31.21	33.26
KRH74950	Soybean	nucleus	32.06	33.19
KRH49522	Soybean	extracellular, plasma membrane	15.92	29.76
KRH01236	Soybean	nucleus	32.27	29.23
KRH44949	Soybean	nucleus	32.27	29.06
KRH34225	Soybean	nucleus	11.68	28.65
KRG98195	Soybean	nucleus	32.91	28.6
KRH17125	Soybean	nucleus	34.39	28.17
KRH72765	Soybean	nucleus	34.18	27.76
KRH30155	Soybean	nucleus	32.27	27.74
KRH65526	Soybean	nucleus	28.24	26.23
KRH00362	Soybean	nucleus	29.51	25.69
KRH76058	Soybean	nucleus	27.6	25.64
KRH40825	Soybean	nucleus	29.51	25.6
KRH55277	Soybean	nucleus	11.46	25.47
KRH14276	Soybean	nucleus	29.51	23.76
KRH73864	Soybean	nucleus	29.51	23.64
KRG98564	Soybean	nucleus	28.66	23.4
KRH46302	Soybean	nucleus	28.45	23.22
KRH26105	Soybean	nucleus	21.66	21.84
KRH54934	Soybean	nucleus	20.81	20.85
KRH03056	Soybean	nucleus	5.1	20.34
KRH03057	Soybean	nucleus	16.14	19.69
KRH14103	Soybean	nucleus	21.02	19.49
KRH74020	Soybean	nucleus	20.59	19.13
KRH40304	Soybean	nucleus	29.72	19.07
KRH72303	Soybean	nucleus	21.44	18.95
KRH62550	Soybean	nucleus	30.57	18.92
KRH00919	Soybean	nucleus	29.72	18.82
KRH56379	Soybean	nucleus	30.36	18.43
KRH34226	Soybean	nucleus	12.31	17.26
KRH34224	Soybean	nucleus	10.4	13.35

Protein Annotations

EntrezGene:100794069	MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:ACUP02012140	EnsemblPlantsGene:GLYMA_19G177400	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1NA43	InterPro:IPR003657
InterPro:IPR036576	EnsemblPlants:KRG95903	ProteinID:KRG95903	ProteinID:KRG95903.1	EMBL:KT031242	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF50	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000233F2FC
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:43672453..43681235

Molecular Weight (calculated)

52468.1 Da

IEP (calculated)

8.835

GRAVY (calculated)

-0.874

Length

471 amino acids

Sequence
(BLAST)

001: MHIKEAERVV IAKPVASRPT CSTFKSFSEL LAGAINASPA IPSSQTTVSA IRPKTVRFKP AMNQPPSGFV FSQADTFGAA LDNSSEMSPK LDTKQSLIYK
101: PTAKLVSKTT VSLLANMGNC STSRQQTQQP MEANFQHSIH EKFRTNTSSN LDQSITPQTE INYQSSEPSK MVQQNIEEDQ KVLTSSVNCD RPSYDGYNWR
201: KYGQKQVKGS EYPRSYYKCT HPNCPVKKKV ERSFDGNIAE IVYKGEHNHS KPQLHKRNSA AGTQGSGVVS DGIVQDMWSN SHSERNEGNE VRIENTGLSM
301: HSDYYVKVPR PNDSALNVGA TNAGGVSTEN SCGLSGECEE GSKGFEAQED EPRYKRRKNE NQSNEAALSE EGLVEPRIVM QSFMDSEILG DGFRWRKYGQ
401: KVVKGNPYPR SYYRCTNIKC NVRKHVERAI DDPRSFVTTY EGKHNHEMPL KNTGTVASER DSQASLSKDK A

Best Arabidopsis Sequence Match ( AT2G37260.2 )
(BLAST)

001: MSCDDDSDSR NYVVYKPKAK LVSKATVSAL ANMGNRQQTW RQSEAVSYGK SVSQGTHRAG PNLVQKVPSF TESETSTGDR SSVDGYNWRK YGQKQVKGSE
101: CPRSYYKCTH PKCPVKKKVE RSVEGQVSEI VYQGEHNHSK PSCPLPRRAS SSISSGFQKP PKSIASEGSM GQDPNNNLYS PLWNNQSNDS TQNRTEKMSE
201: GCVITPFEFA VPRSTNSNPG TSDSGCKSSQ CDEGELDDPS RSKRRKNEKQ SSEAGVSQGS VESDSLEDGF RWRKYGQKVV GGNAYPRSYY RCTSANCRAR
301: KHVERASDDP RAFITTYEGK HNHHLLLSPP SSSTLPFNSP QLSKQTI

Arabidopsis Description

WRKY44WRKY transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.