CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40304	Soybean	nucleus	89.65	90.87
VIT_04s0023g00470.t01	Wine grape	nucleus	35.08	51.99
KRH70820	Soybean	nucleus, plastid	19.35	39.56
KRH34225	Soybean	nucleus	9.68	37.5
KRG98195	Soybean	nucleus	25.54	35.06
KRH17125	Soybean	nucleus	27.02	34.96
KRH72765	Soybean	nucleus	26.88	34.48
KRH30155	Soybean	nucleus	25.13	34.12
KRH49522	Soybean	extracellular, plasma membrane	11.29	33.33
KRH74950	Soybean	nucleus	20.03	32.75
KRH50544	Soybean	nucleus	19.22	32.35
KRH00362	Soybean	nucleus	23.39	32.16
KRH76058	Soybean	nucleus	21.91	32.15
KRG89512	Soybean	nucleus	18.95	32.12
KRH65526	Soybean	nucleus	21.64	31.76
KRH55277	Soybean	nucleus	9.01	31.6
KRH46302	Soybean	nucleus	24.46	31.54
KRG98564	Soybean	nucleus	24.19	31.2
KRH14276	Soybean	nucleus	24.33	30.94
KRH40825	Soybean	nucleus	22.58	30.94
KRH67621	Soybean	nucleus	18.55	30.8
KRH73864	Soybean	nucleus	24.06	30.44
KRH44949	Soybean	nucleus	20.97	29.83
KRG95903	Soybean	nucleus	18.82	29.72
KRH01236	Soybean	nucleus	20.7	29.62
KRH34226	Soybean	nucleus	12.5	27.68
KRH62550	Soybean	nucleus	28.09	27.46
KRH56379	Soybean	nucleus	27.96	26.8
KRH03056	Soybean	nucleus	4.03	25.42
KRH74020	Soybean	nucleus	16.8	24.65
KRH14103	Soybean	nucleus	16.8	24.61
KRH26105	Soybean	nucleus	14.65	23.34
KRH54934	Soybean	nucleus	13.84	21.91
KRH34224	Soybean	nucleus	10.62	21.53
KRH72303	Soybean	nucleus	15.05	21.01
KRH03057	Soybean	nucleus	10.48	20.21

Protein Annotations

EntrezGene:100800211	MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:ACUP02011482	EnsemblPlantsGene:GLYMA_18G242000	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
UniProt:K7MUG9	EnsemblPlants:KRH00919	ProteinID:KRH00919	ProteinID:KRH00919.1	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF1	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000296E0B5	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:53044479..53048545

Molecular Weight (calculated)

81885.2 Da

IEP (calculated)

6.337

GRAVY (calculated)

-0.753

Length

744 amino acids

Sequence
(BLAST)

001: MEQDNLNNNC DEENFVSDSR GRKRSIAERR GFNSNAARIN TALFRTATTS TTTPSPSPAV RSPRLTIPPG ISPTALLDSP IMLPNSQAIS PTVGSFFTLP
101: LLSHEGSMLT TEQGNVDVST AFDVAASFKF KPRGHLDPNP LPPFPASLNQ VSSHFHSVKG ENRESHLLAQ VQPPLDFSCQ ADFSKGHSVK NSEVNSYNDM
201: KMVNDAIVNA NNVEMPMSGS EEVSDESAML KNAINGEDFG GQPASEGEQK EVSHATGAVR TSEDGYNWRK YGQKQVKGSE YPRSYYKCTQ PNCQVKKKVE
301: RSHDGQITEI IYKGAHNHAQ PHPGHRASSL STDEVSDMAE DSTLAKIEGG YVWRNIQTGL KDTKQSFDWK ADGQERTSST SAVTELSDPI STNKAKSLRI
401: FELEDTPELS STLASHDDDE DGTAHALVSA EDEAENDELE PKIRKKESYA VEPNLPPTRA VREPRVVVQI ESDVDILDDG YRWRKYGQKV VKGNPNPRSY
501: YKCTSTGCMV RKHVERASHN LKYVLTTYEG KHNHEVPTAR TNNQVNSSDG GLPPNGANGQ VSLTLPGNAG IPKPETHQTL GHHFDRKPEF SDEFLRPSLV
601: GSFGNDMKFR PSSLCQMKYP SLNNAMPYGS YGLNPERCTA PQAGSIPSMF PDFPMPLPLN LPSSGNFSIA GLNFNRVKPM NPDQSFLSGQ QVKDIDTGFL
701: RPKQEQKDDT MYGSCMPPLD HANASLTSSP SPSIYQRVMH NFPS

Best Arabidopsis Sequence Match ( AT4G26440.1 )
(BLAST)

001: MAGIDNKAAV MGEWFDCSTT NHRKRSKAEL GREFSLNYIK NEDSLQTTFQ ESSRGALRER IAARSGFNAP WLNTEDILQS KSLTISSPGL SPATLLESPV
101: FLSNPLLSPT TGKLSSVPSD KAKAELFDDI TTSLAFQTIS GSGLDPTNIA LEPDDSQDYE ERQLGGLGDS MACCAPADDG YNWRKYGQKL VKGSEYPRSY
201: YKCTHPNCEA KKKVERSREG HIIEIIYTGD HIHSKPPPNR RSGIGSSGTG QDMQIDATEY EGFAGTNENI EWTSPVSAEL EYGSHSGSMQ VQNGTHQFGY
301: GDAAADALYR DENEDDRTSH MSVSLTYDGE VEESESKRRK LEAYATETSG STRASREPRV VVQTTSDIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTAN
401: GCTVTKHVER ASDDFKSVLT TYIGKHTHVV PAARNSSHVG AGSSGTLQGS LATQTHNHNV HYPMPHSRSE GLATANSSLF DFQSHLRHPT GFSVYIGQSE
501: LSDLSMPGLT IGQEKLTSLQ APDIGDPTGL MLQLAAQPKV EPVSPQQGLD LSASSLICRE MLSRLRQI

Arabidopsis Description

WRKY34Probable WRKY transcription factor 34 [Source:UniProtKB/Swiss-Prot;Acc:O65590]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.