CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14103	Soybean	nucleus	92.7	92.52
VIT_12s0057g00550.t01	Wine grape	nucleus	36.09	45.41
Solyc07g047960.2.1	Tomato	nucleus	31.16	38.26
Solyc12g006170.1.1	Tomato	nucleus	30.57	37.35
PGSC0003DMT400015754	Potato	nucleus	30.77	36.97
CDX93073	Canola	nucleus	25.64	35.33
CDY50038	Canola	nucleus	28.99	33.72
Bra013187.1-P	Field mustard	nucleus	29.39	33.33
AT2G04880.1	Thale cress	nucleus	30.57	31.83
KRH55277	Soybean	nucleus	13.21	31.6
KRH70820	Soybean	nucleus, plastid	22.29	31.04
PGSC0003DMT400074158	Potato	nucleus	32.15	29.69
KRH34225	Soybean	nucleus	11.24	29.69
GSMUA_Achr7P25840_001	Banana	nucleus	13.21	27.13
KRH50544	Soybean	nucleus	22.68	26.02
KRH74950	Soybean	nucleus	23.27	25.93
KRH49522	Soybean	extracellular, plasma membrane	12.82	25.79
KRG89512	Soybean	nucleus	22.29	25.74
GSMUA_Achr4P13970_001	Banana	nucleus	24.85	24.56
KRH03056	Soybean	nucleus	5.52	23.73
KRH14276	Soybean	nucleus	27.02	23.42
KRH73864	Soybean	nucleus	26.82	23.13
KRH46302	Soybean	nucleus	26.23	23.05
KRH65526	Soybean	nucleus	22.88	22.88
KRH76058	Soybean	nucleus	22.88	22.88
KRG98564	Soybean	nucleus	26.04	22.88
KRH01236	Soybean	nucleus	23.27	22.69
KRH44949	Soybean	nucleus	23.27	22.56
KRH30155	Soybean	nucleus	24.26	22.45
KRG98195	Soybean	nucleus	23.87	22.32
KRH00362	Soybean	nucleus	23.67	22.18
Os07t0583700-01	Rice	nucleus	26.63	21.84
Zm00001d006702_P001	Maize	nucleus	26.23	21.8
KRH17125	Soybean	nucleus	24.65	21.74
KRH40825	Soybean	nucleus	23.27	21.73
KRH72765	Soybean	nucleus	24.65	21.55
KRH26105	Soybean	nucleus	19.72	21.41
Zm00001d021947_P002	Maize	nucleus	25.84	21.37
KXG36569	Sorghum	nucleus	25.64	21.28
KRH67621	Soybean	nucleus	18.74	21.21
GSMUA_Achr3P29850_001	Banana	nucleus	23.67	20.83
KRG95903	Soybean	nucleus	19.13	20.59
KRH54934	Soybean	nucleus	18.93	20.43
TraesCS2B01G217400.2	Wheat	nucleus	24.06	19.87
HORVU2Hr1G036320.1	Barley	nucleus	24.06	19.84
TraesCS2A01G189700.1	Wheat	nucleus	23.87	19.77
TraesCS2D01G198100.4	Wheat	nucleus	23.87	18.97
KRH72303	Soybean	nucleus	18.74	17.82
KRH34226	Soybean	nucleus	11.64	17.56
KRH40304	Soybean	nucleus	24.46	16.89
KRH03057	Soybean	nucleus	12.82	16.84
KRH00919	Soybean	nucleus	24.65	16.8
KRH62550	Soybean	nucleus	24.65	16.43
KRH56379	Soybean	nucleus	24.46	15.98
KRH34224	Soybean	nucleus	10.65	14.71

Protein Annotations

EntrezGene:100782726	MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:ACUP02001293	EnsemblPlantsGene:GLYMA_02G306300	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	UniProt:I1JJR0	InterPro:IPR003657
InterPro:IPR036576	EnsemblPlants:KRH74020	ProteinID:KRH74020	ProteinID:KRH74020.1	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF1	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000233711D	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:48093518..48095908

Molecular Weight (calculated)

55651.4 Da

IEP (calculated)

6.652

GRAVY (calculated)

-0.886

Length

507 amino acids

Sequence
(BLAST)

001: MVSSDKSADQ NIPSDKLQQR VSLDSDTTLS QGHDTKNDLS KPEEASILSI VVKNEEGKDS DAIACALESD QEGSTCSLPL EKPLQNPDTL SHELPRLQSS
101: QEFPSIIREK VSKDGYNWRK YGQKHVKGNE FIRSYYKCTH PNCLAKKQLQ QSNNGHITDS ICIGQHNHPR PQLNSTVSVE CVLPVVEQAP HKSSLATVED
201: KASVEHGCMP QQIQPLQSFP PAKVSPVNKL NASHLSLTKA KNQVHDNEEP ESKRLKKDNT NPDVTRVDMS TRESRVVVQT SSEVDLVNDG YRWRKYGQKL
301: VKGNTNPRSY YRCSNPGCPV KKHVERASHD SKVVITTYEG QHDHEIPPGR TVTQNAATNA RTTASNGKAG TKSEGNITDD TGERSGLGSA SRLTEQLNGE
401: SITKSKAGDM VEFCVISLSN EGPEIKLSEQ QQQKDNSATK DDSVSNDVIS HSSSGVLCRS NEQLKGEVKP ISEGSKDCLN VVAVHDTRST ESEFNKQSTA
501: DAEPVQS

Best Arabidopsis Sequence Match ( AT2G04880.2 )
(BLAST)

001: MAEVGKVLAS DMELDHSNET KAVDDVVATT DKAEVIPVAV TRTETVVESL ESTDCKELEK LVPHTVASQS EVDVASPVSE KAPKVSESSG ALSLQSGSEG
101: NSPFIREKVM EDGYNWRKYG QKLVKGNEFV RSYYRCTHPN CKAKKQLERS AGGQVVDTVY FGEHDHPKPL AGAVPINQDK RSDVFTAVSK EKTSGSSVQT
201: LRQTEPPKIH GGLHVSVIPP ADDVKTDISQ SSRITGDNTH KDYNSPTAKR RKKGGNIELS PVERSTNDSR IVVHTQTLFD IVNDGYRWRK YGQKSVKGSP
301: YPRSYYRCSS PGCPVKKHVE RSSHDTKLLI TTYEGKHDHD MPPGRVVTHN NMLDSEVDDK EGDANKTPQS STLQSITKDQ HVEDHLRKKT KTNGFEKSLD
401: QGPVLDEKLK EEIKERSDAN KDHAANHAKP EAKSDDKTTV CQEKAVGTLE SEEQKPKTEP AQS

Arabidopsis Description

WRKY1WRKY transcription factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI37]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.