Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG36569 | Sorghum | nucleus | 93.44 | 93.29 |
| Zm00001d021947_P002 | Maize | nucleus | 90.49 | 90.05 |
| Os07t0583700-01 | Rice | nucleus | 78.69 | 77.67 |
| GSMUA_Achr4P13970_001 | Banana | nucleus | 46.39 | 55.17 |
| GSMUA_Achr3P29850_001 | Banana | nucleus | 47.54 | 50.35 |
| GSMUA_Achr7P25840_001 | Banana | nucleus | 20.33 | 50.2 |
| VIT_19s0090g01720.t01 | Wine grape | nucleus | 43.77 | 45.25 |
| KRG98564 | Soybean | nucleus | 41.97 | 44.37 |
| KRH46302 | Soybean | nucleus | 41.8 | 44.19 |
| CDY70490 | Canola | nucleus | 37.05 | 43.63 |
| Bra028971.1-P | Field mustard | nucleus | 34.43 | 43.3 |
| KRH14276 | Soybean | nucleus | 41.48 | 43.25 |
| KRH73864 | Soybean | nucleus | 41.31 | 42.86 |
| AT4G26640.2 | Thale cress | nucleus | 38.36 | 42.01 |
| CDX92808 | Canola | nucleus | 36.07 | 41.98 |
| CDX97359 | Canola | nucleus | 36.89 | 41.9 |
| Bra010431.1-P | Field mustard | nucleus | 37.05 | 41.47 |
| CDX89317 | Canola | nucleus | 36.23 | 41.39 |
| CDY14304 | Canola | nucleus | 37.05 | 41.32 |
| CDX94303 | Canola | nucleus | 35.9 | 41.17 |
| Bra026414.1-P | Field mustard | nucleus | 36.07 | 41.12 |
| VIT_00s0463g00010.t01 | Wine grape | nucleus | 40.98 | 40.85 |
| CDY46692 | Canola | nucleus | 35.08 | 40.76 |
| Solyc12g014610.1.1 | Tomato | nucleus | 40.82 | 40.75 |
| PGSC0003DMT400076670 | Potato | nucleus | 40.33 | 40.26 |
| Solyc07g065260.2.1 | Tomato | nucleus | 37.54 | 38.42 |
| PGSC0003DMT400057409 | Potato | nucleus | 37.54 | 38.42 |
| TraesCS2B01G217400.2 | Wheat | nucleus | 37.38 | 37.13 |
| TraesCS2A01G189700.1 | Wheat | nucleus | 37.21 | 37.09 |
| HORVU2Hr1G036320.1 | Barley | nucleus | 36.89 | 36.59 |
| TraesCS2D01G198100.4 | Wheat | nucleus | 37.21 | 35.58 |
| Zm00001d038023_P001 | Maize | nucleus | 28.03 | 34.97 |
| KRH49522 | Soybean | extracellular, plasma membrane | 14.26 | 34.52 |
| Zm00001d010399_P001 | Maize | nucleus | 27.38 | 33.53 |
| VIT_12s0057g00550.t01 | Wine grape | nucleus | 22.13 | 33.5 |
| Zm00001d043025_P001 | Maize | nucleus | 28.36 | 31.17 |
| Zm00001d041740_P001 | Maize | nucleus | 24.92 | 30.77 |
| CDX93073 | Canola | nucleus | 18.52 | 30.71 |
| Zm00001d035323_P001 | Maize | nucleus | 24.92 | 30.65 |
| Zm00001d038451_P001 | Maize | nucleus | 27.38 | 29.98 |
| Solyc12g006170.1.1 | Tomato | nucleus | 19.84 | 29.16 |
| Solyc07g047960.2.1 | Tomato | nucleus | 19.67 | 29.06 |
| Bra019095.1-P | Field mustard | nucleus | 35.74 | 28.91 |
| PGSC0003DMT400015754 | Potato | nucleus | 19.34 | 27.96 |
| Zm00001d034084_P001 | Maize | nucleus | 19.34 | 27.7 |
| Zm00001d012482_P001 | Maize | nucleus | 26.89 | 27.66 |
| Zm00001d025669_P001 | Maize | nucleus | 29.84 | 27.45 |
| Zm00001d047309_P001 | Maize | nucleus | 21.97 | 26.96 |
| CDY50038 | Canola | nucleus | 19.18 | 26.83 |
| Bra013187.1-P | Field mustard | nucleus | 19.34 | 26.4 |
| Zm00001d003331_P001 | Maize | nucleus | 30.33 | 26.32 |
| KRH74020 | Soybean | nucleus | 21.8 | 26.23 |
| KRH14103 | Soybean | nucleus | 21.64 | 25.98 |
| Zm00001d052847_P001 | Maize | nucleus | 29.34 | 24.55 |
| AT2G04880.1 | Thale cress | nucleus | 19.51 | 24.44 |
| Zm00001d006001_P006 | Maize | nucleus | 22.3 | 23.69 |
| PGSC0003DMT400074158 | Potato | nucleus | 20.82 | 23.13 |
| Zm00001d020881_P002 | Maize | nucleus | 21.64 | 22.41 |
| Zm00001d050023_P001 | Maize | extracellular | 18.69 | 20.14 |
| Zm00001d029564_P001 | Maize | nucleus | 11.48 | 18.57 |
Protein Annotations
| EntrezGene:100382344 | MapMan:15.5.22 | Gene3D:2.20.25.80 | EMBL:BT063979 | EMBL:BT067434 | UniProt:C0P6R0 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 |
| InterPro:IPR036576 | EMBL:KJ727585 | ProteinID:ONM24748.1 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 |
| PANTHER:PTHR31221:SF1 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0001948EAE | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| EnsemblPlantsGene:Zm00001d006702 | EnsemblPlants:Zm00001d006702_P001 | EnsemblPlants:Zm00001d006702_T001 | SEG:seg | : | : |
Description
WRKY-transcription factor 116Probable WRKY transcription factor 20
Coordinates
chr2:-:214685549..214691851
Molecular Weight (calculated)
65681.6 Da
IEP (calculated)
6.906
GRAVY (calculated)
-0.735
Length
610 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSPNPSSG DLPAGPGGSP EKPVLADRRV AALAGAGARY KAMSPARLPI SREPCLTIPA GFSPGALLES PVLLNNFKVE PSPTTGTLSM AAIINKSTHM
101: DIMPSPRDNS AGSGQEDGGS RDFEFKPHLN SHLAAPSVNN QNHHDTMQKY SSNHTTPSSN LKTENKPLCS RESSHTAHAS IAPNQTVSIV CPSDNMPAEV
201: GTMEMHQINS SENATQETQI ENVAEKSAED GYNWRKYGQK HVKGSENPRS YYKCTHPNCE VKKLLERSLN GQVTEVVYKG RHNHSKPQPN RRLAAGAVPS
301: SQGEERYDGV ATIEDKPSNI YSNLCNQVHS AGMIDTVPGP ASDDDVDAGG GRSYPGDDAN DDDLDSKRRK MESTGIDAAL MGKPNREPRV VVQTVSEVDI
401: LDDGYRWRKY GQKVVKGNPN PRSYYKCTNT GCPVRKHVER ASHDPKSVIT TYEGKHNHEV PVSRNASHEM STAPMKPAVH PIKSNMPGLG GMMRACDARA
501: FTNQYSQAAE SDTISLDLGV GISPTHSDAT NQMQPSVPES MQYQMQHMAP VYGSMGLPGM PVTAVPGNSA SSIYGSREEN GNEGFTFKAA PLDRSTNLCY
601: SSAGNLVMGP
101: DIMPSPRDNS AGSGQEDGGS RDFEFKPHLN SHLAAPSVNN QNHHDTMQKY SSNHTTPSSN LKTENKPLCS RESSHTAHAS IAPNQTVSIV CPSDNMPAEV
201: GTMEMHQINS SENATQETQI ENVAEKSAED GYNWRKYGQK HVKGSENPRS YYKCTHPNCE VKKLLERSLN GQVTEVVYKG RHNHSKPQPN RRLAAGAVPS
301: SQGEERYDGV ATIEDKPSNI YSNLCNQVHS AGMIDTVPGP ASDDDVDAGG GRSYPGDDAN DDDLDSKRRK MESTGIDAAL MGKPNREPRV VVQTVSEVDI
401: LDDGYRWRKY GQKVVKGNPN PRSYYKCTNT GCPVRKHVER ASHDPKSVIT TYEGKHNHEV PVSRNASHEM STAPMKPAVH PIKSNMPGLG GMMRACDARA
501: FTNQYSQAAE SDTISLDLGV GISPTHSDAT NQMQPSVPES MQYQMQHMAP VYGSMGLPGM PVTAVPGNSA SSIYGSREEN GNEGFTFKAA PLDRSTNLCY
601: SSAGNLVMGP
001: MNPQANDRKE FQGDCSATGD LTAKHDSAGG NGGGGARYKL MSPAKLPISR STDITIPPGL SPTSFLESPV FISNIKPEPS PTTGSLFKPR PVHISASSSS
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP
Arabidopsis Description
WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.