Factsheet for HORVU2Hr1G036320.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G217400.2	Wheat	nucleus	96.26	96.42
TraesCS2A01G189700.1	Wheat	nucleus	94.63	95.1
TraesCS2D01G198100.4	Wheat	nucleus	96.42	92.95
GSMUA_Achr7P25840_001	Banana	nucleus	15.77	39.27
Bra028971.1-P	Field mustard	nucleus	29.92	37.94
Os07t0583700-01	Rice	nucleus	37.56	37.38
KXG36569	Sorghum	nucleus	37.07	37.32
Zm00001d006702_P001	Maize	nucleus	36.59	36.89
Zm00001d021947_P002	Maize	nucleus	36.75	36.87
GSMUA_Achr4P13970_001	Banana	nucleus	30.57	36.65
CDY70490	Canola	nucleus	30.24	35.91
CDX92808	Canola	nucleus	29.43	34.54
KRH49522	Soybean	extracellular, plasma membrane	13.98	34.13
KRG98564	Soybean	nucleus	31.71	33.8
KRH46302	Soybean	nucleus	31.54	33.62
CDX89317	Canola	nucleus	29.11	33.52
KRH14276	Soybean	nucleus	31.87	33.5
CDX94303	Canola	nucleus	28.94	33.46
VIT_19s0090g01720.t01	Wine grape	nucleus	32.03	33.39
CDY46692	Canola	nucleus	28.46	33.33
GSMUA_Achr3P29850_001	Banana	nucleus	31.06	33.16
Bra026414.1-P	Field mustard	nucleus	28.78	33.08
HORVU7Hr1G049130.1	Barley	nucleus, plastid	13.17	33.06
CDX97359	Canola	nucleus	28.78	32.96
KRH73864	Soybean	nucleus	31.38	32.82
VIT_12s0057g00550.t01	Wine grape	nucleus	21.46	32.75
Bra010431.1-P	Field mustard	nucleus	28.94	32.66
AT4G26640.2	Thale cress	nucleus	29.43	32.5
CDY14304	Canola	nucleus	28.78	32.36
PGSC0003DMT400057409	Potato	nucleus	30.89	31.88
VIT_00s0463g00010.t01	Wine grape	nucleus	31.71	31.86
Solyc12g014610.1.1	Tomato	nucleus	31.38	31.59
PGSC0003DMT400076670	Potato	nucleus	31.22	31.42
Solyc07g065260.2.1	Tomato	nucleus	30.41	31.38
HORVU1Hr1G070250.2	Barley	nucleus, plastid	24.39	29.3
HORVU0Hr1G004890.10	Barley	nucleus	28.46	29.07
CDX93073	Canola	nucleus	17.07	28.53
Solyc07g047960.2.1	Tomato	nucleus	19.02	28.33
HORVU5Hr1G028340.1	Barley	nucleus	22.6	28.25
PGSC0003DMT400015754	Potato	nucleus	19.02	27.73
HORVU3Hr1G088200.4	Barley	nucleus, plastid	26.83	27.55
Solyc12g006170.1.1	Tomato	nucleus	18.54	27.47
HORVU5Hr1G072020.1	Barley	nucleus	29.11	26.48
HORVU2Hr1G034420.2	Barley	nucleus	18.86	25.89
CDY50038	Canola	nucleus	17.89	25.23
HORVU4Hr1G048400.1	Barley	mitochondrion	21.14	24.57
Bra013187.1-P	Field mustard	nucleus	17.72	24.38
KRH74020	Soybean	nucleus	19.84	24.06
KRH14103	Soybean	nucleus	19.67	23.82
Bra019095.1-P	Field mustard	nucleus	28.78	23.47
AT2G04880.1	Thale cress	nucleus	17.72	22.38
PGSC0003DMT400074158	Potato	nucleus	18.86	21.13
HORVU7Hr1G066670.4	Barley	nucleus	17.89	18.97

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A287HPM5	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009611	GO:GO:0009719	GO:GO:0009961	GO:GO:0009987	GO:GO:0043565
GO:GO:0045893	EnsemblPlantsGene:HORVU2Hr1G036320	EnsemblPlants:HORVU2Hr1G036320.1	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF79	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000B47BAE3
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:160425724..160433794

Molecular Weight (calculated)

66399.3 Da

IEP (calculated)

6.956

GRAVY (calculated)

-0.823

Length

615 amino acids

Sequence
(BLAST)

001: MADSPNPSSG DLPSPAGSSP EKPYPADRRV AALAGAGARY KAMSPARLPI SRESCLTIPA GFSPSALLDS PVLLTNFKVE PSPTTGSLGM AAILHKSAHP
101: DMLPSPRDKS VRNAHEDRGS RDFEFKPHLN SSSQSLAPAM SDLKKHEHSM QNQSMNPSSS SSNMVNENRP PCSRESSLTV NVSAQNQPVG MVGLTDSMPA
201: EVGTSEPQQM NSSDNAMQEP QSENVADKSA DDGYNWRKYG QKHVKGSENP RSYYKCTHPN CEVKKLLERA VDGLITEVVY KGRHNHPKPQ PNRRLAGGAV
301: PSNQGEERYD GASAADDKSS NALSNLANPV HSPGMVEPVP ASVSDDDIDA GGGRPYPGDD ATEEEDLESK RRKMESAGID AALMGKPNRE PRVVVQTVSE
401: VDILDDGYRW RKYGQKVVKG NPNPRSYYKC TSTGCPVRKH VERASHDPKS VITTYEGKHN HEVPAARNAT HEMSAPPMKN VVHQINSNMP SSIGGMMRAC
501: EARNYTNQYS QAAETDTVSL DLGVGISPNH SDATNQMQSS GPDQMQYQMQ TMGSMYGNMR HPSSMAAPAV QGNSAGRMYG SREEKGNEGF TFRATPMDHS
601: ANLCYSSAGN LVMGP

Best Arabidopsis Sequence Match ( AT4G26640.2 )
(BLAST)

001: MNPQANDRKE FQGDCSATGD LTAKHDSAGG NGGGGARYKL MSPAKLPISR STDITIPPGL SPTSFLESPV FISNIKPEPS PTTGSLFKPR PVHISASSSS
101: YTGRGFHQNT FTEQKSSEFE FRPPASNMVY AELGKIRSEP PVHFQGQGHG SSHSPSSISD AAGSSSELSR PTPPCQMTPT SSDIPAGSDQ EESIQTSQND
201: SRGSTPSILA DDGYNWRKYG QKHVKGSEFP RSYYKCTHPN CEVKKLFERS HDGQITDIIY KGTHDHPKPQ PGRRNSGGMA AQEERLDKYP SSTGRDEKGS
301: GVYNLSNPNE QTGNPEVPPI SASDDGGEAA ASNRNKDEPD DDDPFSKRRR MEGAMEITPL VKPIREPRVV VQTLSEVDIL DDGYRWRKYG QKVVRGNPNP
401: RSYYKCTAHG CPVRKHVERA SHDPKAVITT YEGKHDHDVP TSKSSSNHEI QPRFRPDETD TISLNLGVGI SSDGPNHASN EHQHQNQQLV NQTHPNGVNF
501: RFVHASPMSS YYASLNSGMN QYGQRETKNE TQNGDISSLN NSSYPYPPNM GRVQSGP

Arabidopsis Description

WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.