Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P13970_001 | Banana | nucleus | 64.78 | 31.19 |
| GSMUA_Achr3P29850_001 | Banana | nucleus | 71.66 | 30.73 |
| GSMUA_Achr3P09940_001 | Banana | nucleus | 34.01 | 22.95 |
| VIT_19s0090g01720.t01 | Wine grape | nucleus | 53.04 | 22.2 |
| Bra028971.1-P | Field mustard | nucleus | 43.32 | 22.06 |
| KRH14276 | Soybean | nucleus | 51.42 | 21.71 |
| KRH73864 | Soybean | nucleus | 51.42 | 21.6 |
| VIT_00s0463g00010.t01 | Wine grape | nucleus | 53.04 | 21.41 |
| CDY70490 | Canola | nucleus | 44.13 | 21.04 |
| KRH46302 | Soybean | nucleus | 48.99 | 20.97 |
| KRG98564 | Soybean | nucleus | 48.58 | 20.8 |
| Zm00001d021947_P002 | Maize | nucleus | 51.42 | 20.72 |
| KXG36569 | Sorghum | nucleus | 51.01 | 20.62 |
| CDY46692 | Canola | nucleus | 43.72 | 20.57 |
| Os07t0583700-01 | Rice | nucleus | 51.01 | 20.39 |
| Bra026414.1-P | Field mustard | nucleus | 44.13 | 20.37 |
| Zm00001d006702_P001 | Maize | nucleus | 50.2 | 20.33 |
| CDX94303 | Canola | nucleus | 43.72 | 20.3 |
| CDX92808 | Canola | nucleus | 42.91 | 20.23 |
| CDX89317 | Canola | nucleus | 43.72 | 20.22 |
| VIT_12s0057g00550.t01 | Wine grape | nucleus | 32.79 | 20.1 |
| AT4G26640.2 | Thale cress | nucleus | 44.94 | 19.93 |
| PGSC0003DMT400057409 | Potato | nucleus | 47.77 | 19.8 |
| CDX97359 | Canola | nucleus | 42.91 | 19.74 |
| Bra010431.1-P | Field mustard | nucleus | 43.32 | 19.63 |
| Solyc07g065260.2.1 | Tomato | nucleus | 47.37 | 19.63 |
| CDY14304 | Canola | nucleus | 43.32 | 19.56 |
| Solyc12g014610.1.1 | Tomato | nucleus | 47.77 | 19.31 |
| PGSC0003DMT400076670 | Potato | nucleus | 47.77 | 19.31 |
| GSMUA_Achr7P00610_001 | Banana | nucleus | 36.84 | 18.88 |
| GSMUA_Achr4P14270_001 | Banana | nucleus | 34.41 | 18.81 |
| GSMUA_Achr7P26450_001 | Banana | nucleus | 36.03 | 18.62 |
| GSMUA_Achr4P07230_001 | Banana | nucleus | 35.22 | 18.51 |
| Solyc12g006170.1.1 | Tomato | nucleus | 30.36 | 18.07 |
| GSMUA_Achr6P16760_001 | Banana | nucleus | 35.22 | 18.05 |
| GSMUA_Achr11P... | Banana | nucleus | 34.01 | 18.03 |
| GSMUA_Achr6P32720_001 | Banana | nucleus | 33.2 | 17.98 |
| GSMUA_Achr10P... | Banana | nucleus | 33.2 | 17.71 |
| CDX93073 | Canola | nucleus | 25.51 | 17.12 |
| GSMUA_Achr6P03500_001 | Banana | nucleus | 35.63 | 17.09 |
| Solyc07g047960.2.1 | Tomato | nucleus | 28.34 | 16.95 |
| PGSC0003DMT400015754 | Potato | nucleus | 27.94 | 16.35 |
| GSMUA_Achr8P01790_001 | Banana | nucleus | 37.25 | 16.14 |
| KRH49522 | Soybean | extracellular, plasma membrane | 16.19 | 15.87 |
| TraesCS2A01G189700.1 | Wheat | nucleus | 39.27 | 15.85 |
| GSMUA_Achr1P17160_001 | Banana | nucleus | 26.32 | 15.82 |
| TraesCS2B01G217400.2 | Wheat | nucleus | 39.27 | 15.8 |
| HORVU2Hr1G036320.1 | Barley | nucleus | 39.27 | 15.77 |
| TraesCS2D01G198100.4 | Wheat | nucleus | 38.87 | 15.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.53 | 14.85 |
| GSMUA_Achr10P... | Banana | nucleus | 27.94 | 14.59 |
| GSMUA_Achr4P16840_001 | Banana | nucleus | 24.7 | 14.49 |
| GSMUA_Achr5P23900_001 | Banana | nucleus | 32.79 | 14.34 |
| CDY50038 | Canola | nucleus | 25.1 | 14.22 |
| Bra013187.1-P | Field mustard | nucleus | 25.51 | 14.09 |
| GSMUA_Achr11P... | Banana | nucleus | 36.84 | 14.06 |
| Bra019095.1-P | Field mustard | nucleus | 42.91 | 14.06 |
| GSMUA_Achr5P04150_001 | Banana | nucleus | 35.22 | 13.74 |
| PGSC0003DMT400074158 | Potato | nucleus | 30.36 | 13.66 |
| GSMUA_Achr4P01600_001 | Banana | nucleus | 36.44 | 13.51 |
| KRH74020 | Soybean | nucleus | 27.13 | 13.21 |
| KRH14103 | Soybean | nucleus | 27.13 | 13.19 |
| AT2G04880.1 | Thale cress | nucleus | 25.91 | 13.14 |
| GSMUA_Achr9P19580_001 | Banana | nucleus | 25.1 | 11.11 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr7G25840_001 | EnsemblPlants:GSMUA_Achr7P25840_001 | EnsemblPlants:GSMUA_Achr7T25840_001 | InterPro:IPR003657 | InterPro:IPR036576 |
| UniProt:M0TKS0 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31221 | PANTHER:PTHR31221:SF1 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI00029595DD | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | : | : |
Description
Putative Probable WRKY transcription factor 20 [Source:GMGC_GENE;Acc:GSMUA_Achr7G25840_001]
Coordinates
chr7:+:27358633..27360229
Molecular Weight (calculated)
27090.9 Da
IEP (calculated)
7.221
GRAVY (calculated)
-0.631
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MERSDGLVTG IIYKGHHDHP KPQSSCRLAA GTMLSCHEEE KTDKLSSLMS VEDESTNAPD HTYHQIDPNS ITEGNCIKYL LDLAIPLIRK MEIANNNSAL
101: IGKTDQEPRV VVQTLSQVDI LDDGYRRRKY GQKIVKGDPN PRSYYKRTNA GCPVRKHIER ASHDPKAVIT TYDGKHNHDV PAAKTISHEA SASVSNPISL
201: DLGVGISTSQ SDATNGSQQL LGTDQIHQHH QAQFVGSGKL VIQATPL
101: IGKTDQEPRV VVQTLSQVDI LDDGYRRRKY GQKIVKGDPN PRSYYKRTNA GCPVRKHIER ASHDPKAVIT TYDGKHNHDV PAAKTISHEA SASVSNPISL
201: DLGVGISTSQ SDATNGSQQL LGTDQIHQHH QAQFVGSGKL VIQATPL
001: MILLPEPSPT TGSLFKPRPV HISASSSSYT GRGFHQNTFT EQKSSEFEFR PPASNMVYAE LGKIRSEPPV HFQGQGHGSS HSPSSISDAA GSSSELSRPT
101: PPCQMTPTSS DIPAGSDQEE SIQTSQNDSR GSTPSILADD GYNWRKYGQK HVKGSEFPRS YYKCTHPNCE VKKLFERSHD GQITDIIYKG THDHPKPQPG
201: RRNSGGMAAQ EERLDKYPSS TGRDEKGSGV YNLSNPNEQT GNPEVPPISA SDDGGEAAAS NRNKDEPDDD DPFSKRRRME GAMEITPLVK PIREPRVVVQ
301: TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTAHGCP VRKHVERASH DPKAVITTYE GKHDHDVPTS KSSSNHEIQP RFRPDETDTI SLNLGVGISS
401: DGPNHASNEH QHQNQQLVNQ THPNGVNFRF VHASPMSSYY ASLNSGMNQY GQRETKNETQ NGDISSLNNS SYPYPPNMGR VQSGP
101: PPCQMTPTSS DIPAGSDQEE SIQTSQNDSR GSTPSILADD GYNWRKYGQK HVKGSEFPRS YYKCTHPNCE VKKLFERSHD GQITDIIYKG THDHPKPQPG
201: RRNSGGMAAQ EERLDKYPSS TGRDEKGSGV YNLSNPNEQT GNPEVPPISA SDDGGEAAAS NRNKDEPDDD DPFSKRRRME GAMEITPLVK PIREPRVVVQ
301: TLSEVDILDD GYRWRKYGQK VVRGNPNPRS YYKCTAHGCP VRKHVERASH DPKAVITTYE GKHDHDVPTS KSSSNHEIQP RFRPDETDTI SLNLGVGISS
401: DGPNHASNEH QHQNQQLVNQ THPNGVNFRF VHASPMSSYY ASLNSGMNQY GQRETKNETQ NGDISSLNNS SYPYPPNMGR VQSGP
Arabidopsis Description
WRKY20Probable WRKY transcription factor 20 [Source:UniProtKB/Swiss-Prot;Acc:Q93WV0]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.