Factsheet for GSMUA_Achr1P17160_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P16840_001	Banana	nucleus	53.53	52.26
KRH67621	Soybean	nucleus	45.99	42.19
VIT_08s0040g03070.t01	Wine grape	nucleus	48.42	41.72
KRG95903	Soybean	nucleus	47.2	41.19
Bra023112.1-P	Field mustard	nucleus	39.42	38.57
AT2G37260.1	Thale cress	nucleus	38.93	37.3
CDX91348	Canola	nucleus	36.25	37.06
Solyc10g084380.1.1	Tomato	nucleus	37.96	36.97
Bra005210.1-P	Field mustard	nucleus	36.25	36.43
PGSC0003DMT400028530	Potato	nucleus	41.12	36.19
CDX74976	Canola	nucleus	35.04	36.18
CDY46768	Canola	nucleus	25.06	31.89
CDY46769	Canola	nucleus	25.06	31.89
CDX79729	Canola	nucleus	24.82	31.68
GSMUA_Achr3P09940_001	Banana	nucleus	27.74	31.15
GSMUA_Achr4P14270_001	Banana	nucleus	29.44	26.77
GSMUA_Achr7P00610_001	Banana	nucleus	31.14	26.56
GSMUA_Achr10P...	Banana	nucleus	29.68	26.35
GSMUA_Achr7P25840_001	Banana	nucleus	15.82	26.32
GSMUA_Achr7P26450_001	Banana	nucleus	30.17	25.94
GSMUA_Achr4P07230_001	Banana	nucleus	29.2	25.53
GSMUA_Achr6P16760_001	Banana	nucleus	29.68	25.31
GSMUA_Achr11P...	Banana	nucleus	28.22	24.89
GSMUA_Achr4P13970_001	Banana	nucleus	29.68	23.78
GSMUA_Achr6P32720_001	Banana	nucleus	25.06	22.59
GSMUA_AchrUn_...	Banana	nucleus	24.57	22.05
GSMUA_Achr5P23900_001	Banana	nucleus	29.93	21.77
GSMUA_Achr6P03500_001	Banana	nucleus	27.25	21.75
GSMUA_Achr8P01790_001	Banana	nucleus	29.44	21.23
GSMUA_Achr10P...	Banana	nucleus	23.84	20.72
GSMUA_Achr3P29850_001	Banana	nucleus	28.22	20.14
GSMUA_Achr11P...	Banana	nucleus	31.39	19.94
GSMUA_Achr4P01600_001	Banana	nucleus	31.14	19.22
GSMUA_Achr5P04150_001	Banana	nucleus	29.44	19.12
GSMUA_Achr9P19580_001	Banana	nucleus	25.55	18.82

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr1G17160_001	EnsemblPlants:GSMUA_Achr1P17160_001	EnsemblPlants:GSMUA_Achr1T17160_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0S0M4	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF50	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000295ED22	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Putative WRKY transcription factor 44 [Source:GMGC_GENE;Acc:GSMUA_Achr1G17160_001]

Coordinates

chr1:-:12808436..12810275

Molecular Weight (calculated)

45048.9 Da

IEP (calculated)

9.568

GRAVY (calculated)

-0.961

Length

411 amino acids

Sequence
(BLAST)

001: MQDAKKIEIA KPVASRPFAS FRPLPELLAR ATSSSPTPSS AERTVAIKPR TMRFKSSSYD SAAEAVPPPD DASEKRSVAT MGSDSVSSFI YKPTAKLVSR
101: TLNLGNFDQV LDQVKTSNSR PQNSASASQS EPNQAYDPSK SVTAGELDTR NQQSADRPSY DGYNWRKYGQ KQVKGSEYPR SYYKCTHPTC PVKKKVERSL
201: DGQIAEIVYK GEHNHPKPQP PKRPSSGSQV ADEHGRETGN PPWSNSLDNH DGLIPTYHFS HDHVLATADD SSTRVVKVGG RAAAVDHDKL DCKRRKNDDR
301: ASGGNSVGEG AAEPHSVMQA SSSVGSDISG DGYHWRKYGQ KVVKGNTFPR SYYRCTNPKC PVRKYVERSS EDSAHLVTTY EGRHNHEMPV RRASRAASDP
401: ETAAAPDGLQ L

Best Arabidopsis Sequence Match ( AT2G37260.1 )
(BLAST)

001: MEVNDGERVV IAKPVASRPS SSSGFRTFTE LLTDSVTVSP QTTCHEIVDA AIRPKTLRFN QPVAASVSCP RAEVKGIGNG MSCDDDSDSR NYVVYKPKAK
101: LVSKATVSAL ANMLQGNRQQ TWRQSEAVSY GKSVSQGTHR AGPNLVQKVP SFTESETSTG DRSSVDGYNW RKYGQKQVKG SECPRSYYKC THPKCPVKKK
201: VERSVEGQVS EIVYQGEHNH SKPSCPLPRR ASSSISSGFQ KPPKSIASEG SMGQDPNNNL YSPLWNNQSN DSTQNRTEKM SEGCVITPFE FAVPRSTNSN
301: PGTSDSGCKS SQCDEGELDD PSRSKRRKNE KQSSEAGVSQ GSVESDSLED GFRWRKYGQK VVGGNAYPRS YYRCTSANCR ARKHVERASD DPRAFITTYE
401: GKHNHHLLLS PPSSSTLPFN SPQLSKQTI

Arabidopsis Description

WRKY44WRKY transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.