Factsheet for GSMUA_Achr4P16840_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P17160_001	Banana	nucleus	52.26	53.53
VIT_08s0040g03070.t01	Wine grape	nucleus	45.61	40.25
Solyc10g084380.1.1	Tomato	nucleus	37.29	37.2
CDX91348	Canola	nucleus	35.39	37.06
KRH67621	Soybean	nucleus	39.43	37.05
AT2G37260.1	Thale cress	nucleus	37.53	36.83
KRG95903	Soybean	nucleus	40.62	36.31
Bra023112.1-P	Field mustard	nucleus	36.1	36.19
CDX74976	Canola	nucleus	34.2	36.18
Bra005210.1-P	Field mustard	nucleus	34.92	35.94
PGSC0003DMT400028530	Potato	nucleus	36.82	33.19
GSMUA_Achr3P09940_001	Banana	nucleus	27.55	31.69
CDX79729	Canola	nucleus	22.09	28.88
CDY46768	Canola	nucleus	22.09	28.79
CDY46769	Canola	nucleus	22.09	28.79
GSMUA_Achr7P25840_001	Banana	nucleus	14.49	24.7
GSMUA_Achr11P...	Banana	nucleus	27.08	24.46
GSMUA_Achr10P...	Banana	nucleus	26.84	24.41
GSMUA_Achr4P14270_001	Banana	nucleus	26.13	24.34
GSMUA_Achr7P00610_001	Banana	nucleus	27.55	24.07
GSMUA_Achr7P26450_001	Banana	nucleus	26.6	23.43
GSMUA_Achr4P07230_001	Banana	nucleus	25.89	23.19
GSMUA_Achr6P03500_001	Banana	nucleus	28.03	22.91
GSMUA_Achr6P16760_001	Banana	nucleus	25.65	22.41
GSMUA_Achr4P13970_001	Banana	nucleus	27.08	22.22
GSMUA_Achr6P32720_001	Banana	nucleus	23.75	21.93
GSMUA_Achr5P23900_001	Banana	nucleus	28.74	21.42
GSMUA_AchrUn_...	Banana	nucleus	22.57	20.74
GSMUA_Achr8P01790_001	Banana	nucleus	27.79	20.53
GSMUA_Achr3P29850_001	Banana	nucleus	28.03	20.49
GSMUA_Achr11P...	Banana	nucleus	29.45	19.17
GSMUA_Achr10P...	Banana	nucleus	20.9	18.6
GSMUA_Achr4P01600_001	Banana	nucleus	28.74	18.17
GSMUA_Achr5P04150_001	Banana	nucleus	27.32	18.17
GSMUA_Achr9P19580_001	Banana	nucleus	22.8	17.2

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr4G16840_001	EnsemblPlants:GSMUA_Achr4P16840_001	EnsemblPlants:GSMUA_Achr4T16840_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0SPJ8	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF50	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002959561	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	:	:

Description

Putative WRKY transcription factor 44 [Source:GMGC_GENE;Acc:GSMUA_Achr4G16840_001]

Coordinates

chr4:-:15374156..15376328

Molecular Weight (calculated)

46261.3 Da

IEP (calculated)

8.430

GRAVY (calculated)

-0.922

Length

421 amino acids

Sequence
(BLAST)

001: MSSPSSSFAI KPKAMKFDPT SNDRAAKAVS PADDVSESAA SRLSEKLCMT TLQADSPLNI LYKPTAKVVS RATAALLANL ENPDAIRQKP TRNYQQPAVV
101: VEQAKPDYVA GRRQSCSRSD LKNQQQPTGC GDRPSYDGYN WRKYGQKQVK GSESPRSYYK CTHPACPVKK KVERSLEGQI AEIVYNGEHN HPKPLPPRKL
201: SSGSQGQAFF SEEAGREAGS NPSWGSSVSE VKVSATSVDE QNEPSLAGIP TYAGRVHFSH ESFIATTYDS SDNNTDASTQ IGKVGSRSRA ASMASDKLDC
301: KRRKNEDPYS GANSVTEDGA EADPITLTAM ECDIPGDGFR WRKYGQKLVK GNTYPRSYYR CTSTKCNVRK YVERASDDSG YYVTTYEGKH NHEMPERKIN
401: FGASDPDTEE GFNGSSDHNF Q

Best Arabidopsis Sequence Match ( AT2G37260.2 )
(BLAST)

001: MSCDDDSDSR NYVVYKPKAK LVSKATVSAL ANMGNRQQTW RQSEAVSYGK SVSQGTHRAG PNLVQKVPSF TESETSTGDR SSVDGYNWRK YGQKQVKGSE
101: CPRSYYKCTH PKCPVKKKVE RSVEGQVSEI VYQGEHNHSK PSCPLPRRAS SSISSGFQKP PKSIASEGSM GQDPNNNLYS PLWNNQSNDS TQNRTEKMSE
201: GCVITPFEFA VPRSTNSNPG TSDSGCKSSQ CDEGELDDPS RSKRRKNEKQ SSEAGVSQGS VESDSLEDGF RWRKYGQKVV GGNAYPRSYY RCTSANCRAR
301: KHVERASDDP RAFITTYEGK HNHHLLLSPP SSSTLPFNSP QLSKQTI

Arabidopsis Description

WRKY44WRKY transcription factor 44 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUU0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.