Factsheet for GSMUA_Achr4P07230_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P14270_001	Banana	nucleus	66.81	69.47
GSMUA_Achr7P26450_001	Banana	nucleus	68.94	67.78
GSMUA_Achr10P...	Banana	nucleus	59.57	60.48
GSMUA_Achr6P16760_001	Banana	nucleus	59.36	57.88
VIT_14s0108g01280.t01	Wine grape	nucleus	55.32	49.34
KRH01236	Soybean	nucleus	52.55	47.5
KRH44949	Soybean	nucleus	52.77	47.42
TraesCS5A01G104900.1	Wheat	nucleus	49.79	47.08
TraesCS5D01G116100.1	Wheat	nucleus	49.79	47.08
TraesCS5B01G108500.1	Wheat	nucleus	49.57	47.07
GSMUA_Achr7P00610_001	Banana	nucleus	48.09	46.89
Os12t0507300-00	Rice	nucleus	39.79	46.87
HORVU5Hr1G028340.1	Barley	nucleus	48.94	46.75
EES16036	Sorghum	nucleus	48.94	46.37
EER94675	Sorghum	nucleus	48.72	45.98
TraesCS4A01G162500.1	Wheat	nucleus	47.66	45.9
TraesCS4D01G151700.1	Wheat	nucleus	47.02	45.57
Zm00001d035323_P001	Maize	nucleus	48.09	45.56
TraesCS4B01G165900.2	Wheat	nucleus	47.02	45.38
Zm00001d041740_P001	Maize	nucleus	47.66	45.34
Zm00001d047309_P001	Maize	nucleus	46.6	44.06
AT3G01080.2	Thale cress	nucleus	41.7	42.52
HORVU4Hr1G048400.1	Barley	mitochondrion	46.17	41.02
CDX74281	Canola	nucleus	38.94	40.58
PGSC0003DMT400003637	Potato	nucleus	38.3	39.91
Solyc02g088340.2.1	Tomato	nucleus	38.94	39.78
Solyc03g104810.2.1	Tomato	nucleus	40.85	39.51
GSMUA_Achr3P09940_001	Banana	nucleus	30.43	39.07
Zm00001d029564_P001	Maize	nucleus	31.28	38.99
PGSC0003DMT400014220	Potato	nucleus	42.55	38.76
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	30.43	38.34
GSMUA_Achr7P25840_001	Banana	nucleus	18.51	35.22
Os07t0596900-00	Rice	nucleus	30.64	33.33
TraesCS2D01G190500.1	Wheat	nucleus	31.7	32.53
TraesCS2B01G209200.1	Wheat	nucleus	32.13	32.27
TraesCS2A01G182700.1	Wheat	nucleus	31.91	32.26
GSMUA_Achr11P...	Banana	nucleus	31.91	32.19
HORVU2Hr1G034420.2	Barley	nucleus	29.79	31.25
GSMUA_Achr6P32720_001	Banana	nucleus	29.15	30.04
GSMUA_AchrUn_...	Banana	nucleus	29.15	29.91
GSMUA_Achr10P...	Banana	nucleus	30.0	29.81
GSMUA_Achr4P13970_001	Banana	nucleus	32.34	29.63
GSMUA_Achr8P01790_001	Banana	nucleus	35.53	29.3
GSMUA_Achr1P17160_001	Banana	nucleus	25.53	29.2
GSMUA_Achr6P03500_001	Banana	nucleus	30.43	27.77
GSMUA_Achr5P23900_001	Banana	nucleus	32.13	26.73
GSMUA_Achr4P16840_001	Banana	nucleus	23.19	25.89
GSMUA_Achr3P29850_001	Banana	nucleus	31.49	25.69
GSMUA_Achr9P19580_001	Banana	nucleus	30.21	25.45
GSMUA_Achr5P04150_001	Banana	nucleus	34.04	25.28
GSMUA_Achr4P01600_001	Banana	nucleus	34.26	24.17
GSMUA_Achr11P...	Banana	nucleus	33.19	24.11

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr4G07230_001	EnsemblPlants:GSMUA_Achr4P07230_001	EnsemblPlants:GSMUA_Achr4T07230_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0SLU0	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF84	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000294B3D2	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Probable WRKY transcription factor 4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G07230_001]

Coordinates

chr4:-:5396511..5400388

Molecular Weight (calculated)

50920.3 Da

IEP (calculated)

8.212

GRAVY (calculated)

-0.660

Length

470 amino acids

Sequence
(BLAST)

001: MAENGSCDSS CGVVVVPEAG AGVPPRPTVS LPPRPSLESL FQGGGSGWGA WEASPGPLTL VSSFFAEDSE SECRSFTQLL AGAMNSPSGS GFVRSGQNRP
101: PSLAISQPQV FAVPPGLSPA SLLDFPAFFS PGQGNFAMSH QKALAQVTAQ AAESPFRLLN QTQLPSPSLA STATTSSQQP IQEIPTLKPS YIAVESAEGS
201: QSDKKSQPHT TIVDKSAQDG YSWRKYGQKV VKGSNYPRSY YKCTHPKCPV KKKVERSVDG QVTEIIYKGQ HNHQRPTPNK RTKVDSNLPC GLDETNGDHG
301: NLEPGFLESN YGTLEQVSGS SDSEEVAAIR IGEGDHNEHD AKRRNIAASS QRTLTEPRII VQTTSEVDLL DDGYRWRKYG QKTVKGNPHP RSYYKCTYAG
401: CRVRKHIERS PTDPKSVITS YEGKHNHDVP AARNSSHSRV TTVSLTSADI KAYDQTPVAL LQLKEEHQVT

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.