Factsheet for TraesCS2D01G190500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G182700.1	Wheat	nucleus	97.16	95.7
TraesCS2B01G209200.1	Wheat	nucleus	96.07	94.02
HORVU2Hr1G034420.2	Barley	nucleus	82.53	84.38
Os07t0596900-00	Rice	nucleus	51.09	54.17
TraesCS4D01G151700.1	Wheat	nucleus	35.59	33.61
GSMUA_Achr4P14270_001	Banana	nucleus	32.1	32.52
GSMUA_Achr10P...	Banana	nucleus	32.31	31.97
GSMUA_Achr4P07230_001	Banana	nucleus	32.53	31.7
GSMUA_Achr7P26450_001	Banana	nucleus	32.1	30.75
GSMUA_Achr6P16760_001	Banana	nucleus	32.1	30.5
TraesCS5D01G116100.1	Wheat	nucleus	32.97	30.38
CDX74281	Canola	nucleus	29.04	29.49
VIT_14s0108g01280.t01	Wine grape	nucleus	33.62	29.22
AT3G01080.2	Thale cress	nucleus	29.26	29.07
KRH01236	Soybean	nucleus	32.31	28.46
KRH44949	Soybean	nucleus	32.31	28.3
Solyc03g104810.2.1	Tomato	nucleus	29.48	27.78
TraesCS5D01G406500.1	Wheat	nucleus	24.89	27.14
PGSC0003DMT400014220	Potato	nucleus	30.35	26.94
PGSC0003DMT400003637	Potato	nucleus	26.2	26.61
Solyc02g088340.2.1	Tomato	nucleus	26.42	26.3
TraesCS1D01G072900.1	Wheat	nucleus	26.64	26.29
TraesCS1D01G292700.1	Wheat	nucleus, plastid	25.76	23.27
TraesCS3D01G341100.1	Wheat	nucleus	28.17	22.99
TraesCS5D01G266300.1	Wheat	nucleus	29.69	20.06
TraesCS7D01G287200.1	Wheat	nucleus	22.05	19.35
TraesCS7D01G239800.2	Wheat	nucleus	26.42	19.27
TraesCS2D01G198100.4	Wheat	nucleus	24.67	17.71
TraesCS2D01G332300.1	Wheat	nucleus	26.64	16.6

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF18	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS2D01G190500	EnsemblPlants:TraesCS2D01G190500.1
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:+:134464067..134474152

Molecular Weight (calculated)

49784.9 Da

IEP (calculated)

6.560

GRAVY (calculated)

-0.649

Length

458 amino acids

Sequence
(BLAST)

001: MAAGQWSGIG DGGGLWAPPA LYSLFPDEQP ALGFYGGSLA QLPSPPPLLG YPQDNFDVFH EQDLAQLAAQ VAQKKELRGK QGAGLHHKIG PQLAFSKYSI
101: LDQVDNSSSF SLATSVLTPQ HVSSSVGAAS MQGQTLPSHT GSGSVNTGPT GVLQVLQDSS TTLDSINTGS AGVLEALQGS SITLDRPADD GYNWRKYGQK
201: AVKGGKYPKS YYKCTLNCPV RKNVEHSADG RIIKIIYRGQ HCHEPPSKRF KDCGDLLNEL DDFNDAKEPS TRSQLGCQGY YGKPITPNGT MVDGLLPTKE
301: EGDEQLSSLS DIREGDCEIR IVDADVGDAD ANERNVPGQK IIVSTTSDVD LLDDGYRWRK YGQKVVRGNP HPRSYYKCTY QGCAVKKHIE RSSEEPHAVI
401: TTYEGKHTHD VPESRNRSQA TGQHHCKEQT YSEQPAASFC SSSEKRKYGT AILNDLAF

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.