Factsheet for GSMUA_Achr4P14270_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P26450_001	Banana	nucleus	72.79	68.83
GSMUA_Achr4P07230_001	Banana	nucleus	69.47	66.81
GSMUA_Achr10P...	Banana	nucleus	63.05	61.56
GSMUA_Achr6P16760_001	Banana	nucleus	60.62	56.85
EES16036	Sorghum	nucleus	52.21	47.58
TraesCS5A01G104900.1	Wheat	nucleus	51.55	46.88
TraesCS5D01G116100.1	Wheat	nucleus	51.55	46.88
TraesCS5B01G108500.1	Wheat	nucleus	51.33	46.87
Zm00001d035323_P001	Maize	nucleus	51.11	46.57
HORVU5Hr1G028340.1	Barley	nucleus	50.66	46.54
Zm00001d041740_P001	Maize	nucleus	50.66	46.36
VIT_14s0108g01280.t01	Wine grape	nucleus	53.54	45.92
KRH01236	Soybean	nucleus	52.21	45.38
Os12t0507300-00	Rice	nucleus	40.04	45.36
GSMUA_Achr7P00610_001	Banana	nucleus	48.23	45.23
KRH44949	Soybean	nucleus	52.21	45.12
EER94675	Sorghum	nucleus	48.89	44.38
Zm00001d047309_P001	Maize	nucleus	47.12	42.86
PGSC0003DMT400003637	Potato	nucleus	42.26	42.35
Solyc02g088340.2.1	Tomato	nucleus	42.7	41.96
AT3G01080.2	Thale cress	nucleus	42.7	41.87
TraesCS4D01G151700.1	Wheat	nucleus	44.69	41.65
TraesCS4A01G162500.1	Wheat	nucleus	44.91	41.6
TraesCS4B01G165900.2	Wheat	nucleus	44.69	41.48
GSMUA_Achr3P09940_001	Banana	nucleus	32.74	40.44
Zm00001d029564_P001	Maize	nucleus	32.96	39.52
Solyc03g104810.2.1	Tomato	nucleus	42.26	39.3
CDX74281	Canola	nucleus	38.5	38.58
PGSC0003DMT400014220	Potato	nucleus	43.58	38.18
HORVU4Hr1G048400.1	Barley	mitochondrion	43.36	37.05
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	29.42	35.66
GSMUA_Achr7P25840_001	Banana	nucleus	18.81	34.41
Os07t0596900-00	Rice	nucleus	32.74	34.26
GSMUA_Achr11P...	Banana	nucleus	33.85	32.83
TraesCS2D01G190500.1	Wheat	nucleus	32.52	32.1
TraesCS2B01G209200.1	Wheat	nucleus	33.19	32.05
TraesCS2A01G182700.1	Wheat	nucleus	32.74	31.83
HORVU2Hr1G034420.2	Barley	nucleus	30.53	30.8
GSMUA_Achr6P32720_001	Banana	nucleus	30.53	30.26
GSMUA_AchrUn_...	Banana	nucleus	30.53	30.13
GSMUA_Achr1P17160_001	Banana	nucleus	26.77	29.44
GSMUA_Achr4P13970_001	Banana	nucleus	33.41	29.43
GSMUA_Achr10P...	Banana	nucleus	29.2	27.91
GSMUA_Achr8P01790_001	Banana	nucleus	34.96	27.72
GSMUA_Achr5P23900_001	Banana	nucleus	33.63	26.9
GSMUA_Achr6P03500_001	Banana	nucleus	30.53	26.8
GSMUA_Achr4P16840_001	Banana	nucleus	24.34	26.13
GSMUA_Achr5P04150_001	Banana	nucleus	35.84	25.59
GSMUA_Achr11P...	Banana	nucleus	36.28	25.35
GSMUA_Achr3P29850_001	Banana	nucleus	32.08	25.17
GSMUA_Achr4P01600_001	Banana	nucleus	36.28	24.62
GSMUA_Achr9P19580_001	Banana	nucleus	30.09	24.37

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr4G14270_001	EnsemblPlants:GSMUA_Achr4P14270_001	EnsemblPlants:GSMUA_Achr4T14270_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0SNU2	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF84	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI000294852B	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Probable WRKY transcription factor 4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G14270_001]

Coordinates

chr4:-:10677680..10685257

Molecular Weight (calculated)

48357.5 Da

IEP (calculated)

8.211

GRAVY (calculated)

-0.623

Length

452 amino acids

Sequence
(BLAST)

001: MNLMAENGGG GGGGGAGGGG GGVVRGGKAA VPGPGTLPRP TITLPPRSSF ESLFHGGAGG ASEVSPGPLT LVSSFFAEES ESDCCSFTQL LVGAINSPSG
101: GGLVRLGQSR PPGLAISQPQ MFTVPLGLSP AGLLDSPAFL SSGLGNFAMS HQEALAQVTA QAAESQFRMQ SEAEFPSSFL AATTSSSSQQ PILETPTIKP
201: TYAAEESADG SQSDRRLESN TAIVNNNAHD GYNWRKYGQK VVKGSEYPRS YYKCTHPKCP VKKKVECSVD GQVTEIIYKG QHNHQRPTPN KRAKEANKSD
301: HGTPEQLSGS SDGEEGAEIR TDEGDDDDER DPKRRNMAAS SHRTLNEPRI IVQTTSEVDL LDDGYRWRKY GQKVVKGNPN PRSYYKCTYA GCNVRKHIER
401: SPTDPKAVIT SYEGKHNHDI PAARNSSHNT VSRPLSPRFR LTIRIIVISI CI

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.