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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G182700.1 Wheat nucleus 55.09 51.18
TraesCS2D01G190500.1 Wheat nucleus 54.17 51.09
TraesCS2B01G209200.1 Wheat nucleus 54.86 50.64
HORVU2Hr1G034420.2 Barley nucleus 49.54 47.77
Os03t0444900-00 Rice endoplasmic reticulum, golgi 29.63 34.32
Os12t0507300-00 Rice nucleus 30.56 33.08
GSMUA_Achr4P14270_001 Banana nucleus 34.26 32.74
AT3G01080.2 Thale cress nucleus 34.26 32.1
CDX74281 Canola nucleus 32.87 31.49
GSMUA_Achr10P... Banana nucleus 33.33 31.1
GSMUA_Achr7P26450_001 Banana nucleus 34.26 30.96
GSMUA_Achr4P07230_001 Banana nucleus 33.33 30.64
VIT_14s0108g01280.t01 Wine grape nucleus 36.81 30.17
GSMUA_Achr6P16760_001 Banana nucleus 33.33 29.88
KRH44949 Soybean nucleus 35.65 29.45
KRH01236 Soybean nucleus 35.42 29.42
Solyc02g088340.2.1 Tomato nucleus 31.02 29.13
PGSC0003DMT400003637 Potato nucleus 30.32 29.05
Solyc03g104810.2.1 Tomato nucleus 31.25 27.78
Os03t0758950-01 Rice nucleus, plastid 26.62 26.2
PGSC0003DMT400014220 Potato nucleus 31.25 26.16
Os05t0343400-01 Rice nucleus 29.4 26.08
Os01t0826400-01 Rice extracellular 31.25 24.32
Os05t0474800-01 Rice nucleus 30.09 22.73
Os07t0583700-01 Rice nucleus 29.4 20.55
Os08t0499300-01 Rice nucleus 31.71 20.33
Os08t0276200-01 Rice cytosol, nucleus, plastid 13.66 16.12
Os09t0481700-01 Rice nucleus 23.38 15.96
Os04t0471700-00 Rice nucleus 30.56 13.23
Os03t0758900-01 Rice plastid 1.16 1.23
Protein Annotations
MapMan:15.5.22Gene3D:2.20.25.80EntrezGene:4343795EMBL:AY341847ProteinID:BAC55703.1ProteinID:BAF22087.1
ProteinID:BAT02481.1GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0043565
InterPro:IPR003657InterPro:IPR036576EnsemblPlantsGene:Os07g0596900EnsemblPlants:Os07t0596900-00PFAM:PF03106PFscan:PS50811
PANTHER:PTHR31221PANTHER:PTHR31221:SF18UniProt:Q84ZK2SMART:SM00774SUPFAM:SSF118290UniParc:UPI000000454B
InterPro:WRKY_domInterPro:WRKY_dom_sfRefSeq:XP_015646950.1SEG:seg::
Description
WRKY GENE 88Similar to SUSIBA2-like (WRKY transcription factor 80). (Os07t0596900-00)
Coordinates
chr7:-:24312094..24315383
Molecular Weight (calculated)
46336.0 Da
IEP (calculated)
6.507
GRAVY (calculated)
-0.567
Length
432 amino acids
Sequence
(BLAST)
001: MAAARRVAGG GGGSLWGPPQ PPPSTGGGIP QLPAAAAAPV EGLLDAPFSS SSGGGGGGWP PPPPPLSGTA VLIGYPQGNF ETFPQQDLVP LTAQEVHSKC
101: ITFGRAENLP FIPLATSALV SQHTGSSSVN VTPLQEILTS PSQISNVNTE SIGVLQGLPA SSIVLDRPTD DGYNWRKYGQ KAVKGGEYPK SYYKCTHLNC
201: LVRKNVEHSA DGRIVQIIYR GQHTHERPSK RRFKDCGGIS DDLDDFSGTT GTSVRSQPDY DDYCRKPIIP SGTMVAPLVK KIEDGDDQLS GSSDNQDEHD
301: DEVRTSDGAS GDASANERNV PAPGQKIIVS TTSEIDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTYLGCD VKKQVERSVE EPNAVITTYE GKHIHDVPAA
401: RNKSHVVANA SLLQNTKSNT YCTEQSYTTI TC
Best Arabidopsis Sequence Match ( AT2G03340.1 )
(BLAST)
001: MAEKEEKEPS KLKSSTGVSR PTISLPPRPF GEMFFSGGVG FSPGPMTLVS NLFSDPDEFK SFSQLLAGAM ASPAAAAVAA AAVVATAHHQ TPVSSVGDGG
101: GSGGDVDPRF KQSRPTGLMI TQPPGMFTVP PGLSPATLLD SPSFFGLFSP LQGTFGMTHQ QALAQVTAQA VQGNNVHMQQ SQQSEYPSST QQQQQQQQQA
201: SLTEIPSFSS APRSQIRASV QETSQGQRET SEISVFEHRS QPQNADKPAD DGYNWRKYGQ KQVKGSDFPR SYYKCTHPAC PVKKKVERSL DGQVTEIIYK
301: GQHNHELPQK RGNNNGSCKS SDIANQFQTS NSSLNKSKRD QETSQVTTTE QMSEASDSEE VGNAETSVGE RHEDEPDPKR RNTEVRVSEP VASSHRTVTE
401: PRIIVQTTSE VDLLDDGYRW RKYGQKVVKG NPYPRSYYKC TTPDCGVRKH VERAATDPKA VVTTYEGKHN HDVPAARTSS HQLRPNNQHN TSTVNFNHQQ
501: PVARLRLKEE QIT
Arabidopsis Description
WRKY3Putative WRKY DNA-binding protein [Source:UniProtKB/TrEMBL;Acc:Q0WPM8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.