Factsheet for Os03t0758900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 3
peroxisome 1
plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	cytosol, plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

plastid: 17189339

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0276200-01	Rice	cytosol, nucleus, plastid	2.96	3.28
Os04t0471700-00	Rice	nucleus	5.68	2.3
KRH54934	Soybean	nucleus	2.47	2.13
CDY36463	Canola	nucleus	1.73	1.75
KRH26105	Soybean	nucleus	1.98	1.71
VIT_11s0037g00150.t01	Wine grape	nucleus	1.98	1.6
CDY23265	Canola	nucleus	1.73	1.53
Bra010266.1-P	Field mustard	nucleus	1.73	1.53
Solyc07g005650.2.1	Tomato	nucleus	1.73	1.36
KRH72303	Soybean	nucleus	1.73	1.31
AT4G30935.1	Thale cress	nucleus	1.48	1.29
Os07t0596900-00	Rice	nucleus	1.23	1.16
CDY13396	Canola	nucleus	1.48	1.13
Os09t0481700-01	Rice	nucleus	1.73	1.11
Os08t0499300-01	Rice	nucleus	1.73	1.04
Os01t0826400-01	Rice	extracellular	1.23	0.9
Bra024035.1-P	Field mustard	nucleus	1.23	0.85
Os12t0507300-00	Rice	nucleus	0.74	0.75
CDX72277	Canola	nucleus	1.23	0.68
Os05t0474800-01	Rice	nucleus	0.74	0.52
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	0.25	0.27
Os05t0343400-01	Rice	nucleus	0.25	0.21
VIT_04s0008g06600.t01	Wine grape	nucleus	0.25	0.2
Os07t0583700-01	Rice	nucleus	0.25	0.16
Os03t0758950-01	Rice	nucleus, plastid	0.0	0.0
PGSC0003DMT400029069	Potato	mitochondrion	0.0	0.0

Protein Annotations

MapMan:1.1.9.3.2	Gene3D:2.40.128.20	EntrezGene:4334178	ProteinID:AAK16173.1	ProteinID:AAK63921.1	ProteinID:BAS86488.1
InterPro:Calycin	InterPro:DUF3598	ProteinID:EEE59966.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0032955
GO:GO:0043565	GO:GO:0051301	InterPro:IPR012674	InterPro:MinE	EnsemblPlantsGene:Os03g0758900	EnsemblPlants:Os03t0758900-01
PFAM:PF12204	PANTHER:PTHR33404	PANTHER:PTHR33404:SF3	UniProt:Q9AUW4	SUPFAM:SSF50814	SignalP:SignalP-noTM
UniParc:UPI00000A616E	RefSeq:XP_015630963.1	SEG:seg	:	:	:

Description

WRKY GENE 4Similar to predicted protein. (Os03t0758900-01)

Coordinates

chr3:+:31391410..31394044

Molecular Weight (calculated)

44857.0 Da

IEP (calculated)

5.081

GRAVY (calculated)

-0.343

Length

405 amino acids

Sequence
(BLAST)

001: MAEALVAVLR LAASAAATAR PQSRSGRHGS CAARVPCPGP SPFRRGRLCA RAAVAGPPEV DDDDAMTIDN LRRFFDVNVG KWNGAFYQFD AHGRVLQGIS
101: TRLSVSTYGE DDLISLLQSL YIKQASSQIS FVDEEDSEEW VEYKIKETNM FTVDKYQQVG FFQEEKAFAL RYQTAGMLET VLRAGVLGED DTGEESPKNL
201: KIPSRKPSIV CENCLYSREG NGRVRAFHIM DPKGVLDMLI IFHEKQGSEV PLMYSSDDAD ITNSDRIAPL LGRWEGRSVT KRSGVYGATL SEADTVVLLE
301: KDRNGQLILD NMSTKSGSST TTTVHWTGSA NNNLLQFDGG YEMTLLPGGM YMGYPTDIGK IVNDMDSFHL EFCWMESPGK RQRLVRTYDS AGLAVSSTYF
401: FETKV

Best Arabidopsis Sequence Match ( AT3G29185.1 )
(BLAST)

001: MAAATSFTCS LPFTPLSKSL KPIRSPILRS DYGTSRSFVI RSMTVQEDDK RTSDESMSID NLRGFVDLNV GKWTGSFHQF DGNGNLLHKI DTRLSASSYG
101: EDELLSLNQS LYIKQPTSAT SVSEEEEEEP EWVEYKIKET NMFTVDKYQQ IGFFPKERAF SLRYQTAGML DTTLRQGVLG EDDTGEESPR NLKLPSRRPS
201: LVCENCLYSK EIDRRARAFH IMDPKGVLEM LIVFLEERGL ENLAHPVLDN AQNDAERINP FLGTWKGRSV TKRSGVYGAT LSEADTVAVL EMNDKGQVVQ
301: DISSTSDEKK VTTNVHWEGK MSKDLVTFAE GYQMTLLPGG MYMGCPCDVS KCVADLKSFH LEFCWLESPS SRQRLIRTYD HEGLAVSSTY FTETKM

Arabidopsis Description

Glutamate NMDA receptor subunit epsilon-1, putative (DUF3598) [Source:UniProtKB/TrEMBL;Acc:F4J1U2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.