Factsheet for VIT_11s0037g00150.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029069	Potato	mitochondrion	18.64	76.23
KRH26105	Soybean	nucleus	51.1	54.6
KRH54934	Soybean	nucleus	50.5	53.62
CDY36463	Canola	nucleus	40.68	50.88
KRH72303	Soybean	nucleus	53.31	49.91
Solyc07g005650.2.1	Tomato	nucleus	49.3	47.95
Bra010266.1-P	Field mustard	nucleus	42.89	46.83
AT4G30935.1	Thale cress	nucleus	43.69	46.78
CDY23265	Canola	nucleus	41.88	45.73
VIT_04s0008g06600.t01	Wine grape	nucleus	43.89	44.6
CDY13396	Canola	nucleus	36.07	33.9
GSMUA_Achr10P...	Banana	nucleus	29.06	30.66
Bra024035.1-P	Field mustard	nucleus	34.67	29.37
TraesCS7A01G294800.2	Wheat	nucleus	29.86	28.54
TraesCS7D01G287200.1	Wheat	nucleus	29.66	28.35
TraesCS7B01G185400.2	Wheat	nucleus	29.46	28.16
EES14907	Sorghum	nucleus	30.86	27.07
GSMUA_AchrUn_...	Banana	nucleus	24.65	26.86
Zm00001d050023_P001	Maize	extracellular	30.06	26.5
CDX72277	Canola	nucleus	38.88	26.47
GSMUA_Achr9P19580_001	Banana	nucleus	29.46	26.34
HORVU7Hr1G066670.4	Barley	nucleus	29.66	25.52
VIT_01s0011g00220.t01	Wine grape	nucleus	25.45	25.3
VIT_14s0108g01280.t01	Wine grape	nucleus	24.85	23.53
VIT_12s0057g00550.t01	Wine grape	nucleus	18.44	22.83
VIT_08s0040g03070.t01	Wine grape	nucleus	20.84	21.8
Os03t0758950-01	Rice	nucleus, plastid	18.64	21.18
VIT_08s0058g00690.t01	Wine grape	nucleus	22.24	20.11
VIT_06s0004g07500.t01	Wine grape	nucleus	23.85	19.73
VIT_04s0023g00470.t01	Wine grape	nucleus	19.44	19.32
VIT_19s0090g01720.t01	Wine grape	nucleus	20.84	17.63
VIT_00s0463g00010.t01	Wine grape	nucleus	21.04	17.16
VIT_19s0015g01870.t01	Wine grape	nucleus	23.05	15.42
Os03t0758900-01	Rice	plastid	1.6	1.98

Protein Annotations

EntrezGene:100262194	wikigene:100262194	MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:CBI36524	ProteinID:CBI36524.3
UniProt:D7U1A8	EMBL:FN596499	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016787	GO:GO:0016887	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	EntrezGene:LOC100262194	wikigene:LOC100262194	PFAM:PF03106	PFscan:PS50811
PANTHER:PTHR31221	PANTHER:PTHR31221:SF34	SMART:SM00774	SUPFAM:SSF118290	TIGR:TC69013	TIGR:TC70344
UniParc:UPI00019844CA	ArrayExpress:VIT_11s0037g00150	EnsemblPlantsGene:VIT_11s0037g00150	EnsemblPlants:VIT_11s0037g00150.t01	unigene:Vvi.9260	InterPro:WRKY_dom
InterPro:WRKY_dom_sf	RefSeq:XP_002276194	RefSeq:XP_002276194.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr11:+:7838041..7845641

Molecular Weight (calculated)

53817.4 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.822

Length

499 amino acids

Sequence
(BLAST)

001: MAGNQSFEAP EAEKAEPNPE SDSGSDSDSA ESGSEDGEGL SDSEGVGAAE LGEPRESETL AVASSITESG SQLLSGSALN STSQSLASVE FKEQAGVCHQ
101: EVRTTVTAQT THVQTKKQLQ SSGCPTSSVE LSPTSVTQSI QSAPSPTILE QRPSPFPKVN SECMPEGNQK NSSDLKTIST VPSVKTPSAD GYNWRKYGQK
201: QVKSPKGSRS YYKCTYSDCY AKKIECCDDS GQVIEIIYKS RHNHDPPRKI NCMKEGKLSP VGPVTGNSTT ADPVRMLNDS DPSTSSKEPV QETPLIPERK
301: RPNSDASDEN PEIKVKEEHI DEPEPKRRSK KSSLGNSGSH FKPGKKPKFV VHAAGDVGIS GDGYRWRKYG QKMVKGNPHP RNYYRCTSAG CPVRKHIETA
401: IDNTSAVIIT YKGIHDHDMP VPKKRHGPPS APLVAAAAPA SMNSLQFKKT EAFQNQISST QWSVDMEGEL AAEELDPGGE KAMESARTLL SIGFEIKPC

Best Arabidopsis Sequence Match ( AT4G30935.1 )
(BLAST)

001: MEEDTGIDEA KTYTVEKSEK VEPEKDGLSQ FRDEEKSLGA DMEDLHDETV RETLGKDQVQ GVRENSSVEP NVEDVLEVNE TDSVKETVVS AIVPVDEVEE
101: NRQVETSPSL AASSDSLTVT PCLSLDPATA STAQDLPLVS VPTKQEQRSD SPVVNRLSVT PVPRTPARDG YNWRKYGQKQ VKSPKGSRSY YRCTYTECCA
201: KKIECSNDSG NVVEIVNKGL HTHEPPRKTS FSPREIRVTT AIRPVSEDDT VVEELSIVPS GSDPSASTKE YICESQTLVD RKRHCENEAV EEPEPKRRLK
301: KDNSQSSDSV SKPGKKNKFV VHAAGDVGIC GDGYRWRKYG QKMVKGNPHP RNYYRCTSAG CPVRKHIETA VENTKAVIIT YKGVHNHDMP VPKKRHGPPS
401: SMLVAAAAPT SMRTRTDDQV NIPTSSQCSV GRESEKQSKE ALDVGGEKVM ESARTLLSIG FEIKQC

Arabidopsis Description

WRKY32Probable WRKY transcription factor 32 [Source:UniProtKB/Swiss-Prot;Acc:P59583]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.