Factsheet for Os03t0758950-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

plastid: 17189339

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0507300-00	Rice	nucleus	29.61	32.58
Os05t0343400-01	Rice	nucleus	30.07	27.1
Os07t0596900-00	Rice	nucleus	26.2	26.62
Os03t0444900-00	Rice	endoplasmic reticulum, golgi	22.55	26.54
Os01t0826400-01	Rice	extracellular	31.66	25.05
Os05t0474800-01	Rice	nucleus	28.25	21.68
Os07t0583700-01	Rice	nucleus	30.07	21.36
PGSC0003DMT400029069	Potato	mitochondrion	5.92	21.31
CDY36463	Canola	nucleus	19.13	21.05
VIT_04s0008g06600.t01	Wine grape	nucleus	21.64	19.35
Os08t0499300-01	Rice	nucleus	29.61	19.29
CDY23265	Canola	nucleus	19.59	18.82
AT4G30935.1	Thale cress	nucleus	19.82	18.67
VIT_11s0037g00150.t01	Wine grape	nucleus	21.18	18.64
KRH26105	Soybean	nucleus	19.82	18.63
Bra010266.1-P	Field mustard	nucleus	19.36	18.6
KRH54934	Soybean	nucleus	19.36	18.09
Solyc07g005650.2.1	Tomato	nucleus	20.27	17.35
KRH72303	Soybean	nucleus	20.27	16.7
CDY13396	Canola	nucleus	19.36	16.01
Os09t0481700-01	Rice	nucleus	22.1	15.32
Bra024035.1-P	Field mustard	nucleus	18.91	14.09
Os04t0471700-00	Rice	nucleus	31.66	13.93
Os08t0276200-01	Rice	cytosol, nucleus, plastid	11.16	13.39
CDX72277	Canola	nucleus	20.05	12.01
Os03t0758900-01	Rice	plastid	0.0	0.0

Protein Annotations

EntrezGene:107276591	MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:AAK16171.1	ProteinID:AAK63923.1	EMBL:AY341848
ProteinID:BAS86489.1	ProteinID:DAA05069.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	EnsemblPlantsGene:Os03g0758950
EnsemblPlants:Os03t0758950-01	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31221	PANTHER:PTHR31221:SF49	UniProt:Q9AUW5
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000009F03F	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_015630965.1
SEG:seg	:	:	:	:	:

Description

OsWRKY4Transcriptional activator, Defense responses to rice sheath blight (Os03t0758950-01)

Coordinates

chr3:+:31395468..31398928

Molecular Weight (calculated)

46371.9 Da

IEP (calculated)

6.676

GRAVY (calculated)

-0.686

Length

439 amino acids

Sequence
(BLAST)

001: MADRRRSDGG GGMQQQPFTS PGQERVFDGG GVPGQVAAPY GSDFDQSSYM ALLAAGAVGV GVGVQPTAAP WAVEEDVAAA PPGISLAPQF SMANYAPPPS
101: YQHPATLVSP PLAAGLHPYP PYLHGVDAPP PQWPPRPAPP PSFSVLDLAA AAAPHEQRHS MQQLLLRAAA FGGGMHAAAA PAPAAAAAIE QPAKDGYNWR
201: KYGQKQLKDA ESPRSYYKCT RDGCPVKKIV ERSSDGCIKE ITYKGRHSHP RPVEPRRGGA ASSSSSAMAA GTDHNAGAAA DDAAAADEDD PSDDDDTLLH
301: EDDDDGEEGH DRGVDGEVGQ RVVRKPKIIL QTRSEVDLLD DGYRWRKYGQ KVVKGNPRPR SYYKCTADGC NVRKQIERAS ADPKCVLTTY TGRHNHDPPG
401: RPPAAANLQM PGPAAMRLAG GGTAHQQPSG GAHQMKEET

Best Arabidopsis Sequence Match ( AT1G13960.1 )
(BLAST)

001: MSEKEEAPST SKSTGAPSRP TLSLPPRPFS EMFFNGGVGF SPGPMTLVSN MFPDSDEFRS FSQLLAGAMS SPATAAAAAA AATASDYQRL GEGTNSSSGD
101: VDPRFKQNRP TGLMISQSQS PSMFTVPPGL SPAMLLDSPS FLGLFSPVQG SYGMTHQQAL AQVTAQAVQA NANMQPQTEY PPPSQVQSFS SGQAQIPTSA
201: PLPAQRETSD VTIIEHRSQQ PLNVDKPADD GYNWRKYGQK QVKGSEFPRS YYKCTNPGCP VKKKVERSLD GQVTEIIYKG QHNHEPPQNT KRGNKDNTAN
301: INGSSINNNR GSSELGASQF QTNSSNKTKR EQHEAVSQAT TTEHLSEASD GEEVGNGETD VREKDENEPD PKRRSTEVRI SEPAPAASHR TVTEPRIIVQ
401: TTSEVDLLDD GYRWRKYGQK VVKGNPYPRS YYKCTTPGCG VRKHVERAAT DPKAVVTTYE GKHNHDLPAA KSSSHAAAAA QLRPDNRPGG LANLNQQQQQ
501: QPVARLRLKE EQTT

Arabidopsis Description

WRKY4Probable WRKY transcription factor 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9XI90]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.